RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SERPIND1P05546 499 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 ZGLP1P0C6A0 271 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 COX6A1P12074 109 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 GRIA3P42263 894 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 OCA2Q04671 838 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 KLC1Q07866 573 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 TBCCQ15814 346 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 PDCD2Q16342 344 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 IMPG1Q17R60 797 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 SCIMPQ6UWF3 145 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 Q6ZPB1 254 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 HOMEZQ8IX15 550 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 THAP3Q8WTV1 239 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 SELENOMQ8WWX9 145 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 ZUFSPQ96AP4 578 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 TREX2Q9BQ50 279 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.357e-9■■□□□ 12.4
SEC13-205ENST00000397101 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 PTGFRNQ9P2B2 879 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
SEC13-205ENST00000397101 VTI1BQ9UEU0 232 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 ZNF835Q9Y2P0 537 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 KLK4Q9Y5K2 254 aa12.86□□□□□ -0.35
SEC13-205ENST00000397101 PCNX1Q96RV3 2341 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 C19orf84I3L1E1 186 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 HAT1O14929 419 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ULK1O75385 1050 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 WFS1O76024 890 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 FGF4P08620 206 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
SEC13-205ENST00000397101 CASP2P42575 452 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 OR1D4P47884 311 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 HK2P52789 917 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 FOXA1P55317 472 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 KRTAP10-9P60411 292 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 CSNK1G2P78368 415 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 GGTA1PQ4G0N0 100 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 SHISA6Q6ZSJ9 500 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 SUN3Q8TAQ9 357 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 CHTF18Q8WVB6 975 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ZNF317Q96PQ6 595 aaPredicted RBP12.85□□□□□ -0.35
SEC13-205ENST00000397101 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 TNFRSF12AQ9NP84 129 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 RIC8BQ9NVN3 520 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 C3orf18Q9UK00 162 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ZNF225Q9UK10 706 aa12.85□□□□□ -0.35
SEC13-205ENST00000397101 ZNF490Q9ULM2 529 aaPredicted RBP12.85□□□□□ -0.35
SEC13-205ENST00000397101 IGHV1-45A0A0A0MS14 117 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 TRBC2A0A5B9 178 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 OR5H15A6NDH6 313 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 TRPC5OSA6NMA1 111 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 MANBAO00462 879 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 PRAMEF2O60811 474 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
SEC13-205ENST00000397101 WDPCPO95876 746 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 ICAM2P13598 275 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 KIR3DL1P43629 444 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 NEK2P51955 445 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 EMP3P54852 163 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
SEC13-205ENST00000397101 REEP5Q00765 189 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 C3AR1Q16581 482 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 KRTCAP3Q53RY4 240 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 TCHHL1Q5QJ38 904 aaPredicted RBP12.84□□□□□ -0.35
SEC13-205ENST00000397101 FRG2Q64ET8 278 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 ZNF740Q8NDX6 193 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 RERGQ96A58 199 aaPredicted RBP12.84□□□□□ -0.35
SEC13-205ENST00000397101 WDR34Q96EX3 536 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 FRG2BQ96QU4 278 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 ELAC2Q9BQ52 826 aaKnown RBP12.84□□□□□ -0.35
SEC13-205ENST00000397101 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 USH1CQ9Y6N9 552 aa12.84□□□□□ -0.35
SEC13-205ENST00000397101 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 IGKV1-8A0A0C4DH67 115 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 A0A0G2JND7 137 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 HYKKA2RU49 373 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 H0YIV9 168 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 SLC28A1O00337 649 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
SEC13-205ENST00000397101 HDAC3O15379 428 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms