RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 DBF4BQ8NFT6 615 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 OR4M2Q8NGB6 313 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SPATA9Q9BWV2 254 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 KLF16Q9BXK1 252 aaPredicted RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SLC12A9Q9BXP2 914 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SGK2Q9HBY8 427 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SLC25A19Q9HC21 320 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 TXNL4BQ9NX01 149 aaKnown RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 ZDHHC3Q9NYG2 299 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 NLKQ9UBE8 527 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 FTSJ1Q9UET6 329 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 TPST2O60704 377 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 JUPP14923 745 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 PREPP48147 710 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 CRISP1P54107 249 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 LSRQ86X29 649 aaPredicted RBP22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 PHC2Q8IXK0 858 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 L3MBTL4Q8NA19 623 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 OR8H1Q8NGG4 311 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 TMEM203Q969S6 136 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 TMEM80Q96HE8 168 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.89■■□□□ 1.266e-7■■■■■ 27.1
CSNK1E-203ENST00000396832 ZDHHC6Q9H6R6 413 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 ACER3Q9NUN7 267 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 HELZP42694 1942 aaKnown RBP22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 CDH23Q9H251 3354 aa22.89■■□□□ 1.26
CSNK1E-203ENST00000396832 TEX51A0A1B0GUA7 166 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 MGAT4DA6NG13 374 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 GASTP01350 101 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 ACADMP11310 421 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 APEX1P27695 318 aaKnown RBP22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 CD70P32970 193 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 HBA1P69905 142 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 PTSQ03393 145 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 TEAD4Q15561 434 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 FAM46DQ8NEK8 389 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 KLHL6Q8WZ60 621 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 CASD1Q96PB1 797 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 RACGAP1Q9H0H5 632 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 BRD9Q9H8M2 597 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 C12orf10Q9HB07 376 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 GLTPQ9NZD2 209 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 A8MVJ9 347 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 FADS2P1A8MWK0 482 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 TNFRSF21O75509 655 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 LGI1O95970 557 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 IL1AP01583 271 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 OR56A5P0C7T3 313 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 PRKAR2AP13861 404 aaKnown RBP22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 BDKRB1P46663 353 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 PRKCZQ05513 592 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 C22orf42Q6IC83 251 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 PAQR6Q6TCH4 344 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 OTOP2Q7RTS6 562 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 OR9Q1Q8NGQ5 310 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 ALG14Q96F25 216 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 ZBED6CLQ96FA7 236 aaPredicted RBP22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 GFM1Q96RP9 751 aaKnown RBP22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 MND1Q9BWT6 205 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 RBFOX1Q9NWB1 397 aaKnown RBP22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 DNAJC27Q9NZQ0 273 aa22.89■■□□□ 1.25
CSNK1E-203ENST00000396832 WASHC1A8K0Z3 465 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 C6orf47O95873 294 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 GALTP07902 379 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 SLC2A2P11168 524 aaPredicted RBP22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 PBLDP30039 288 aaPredicted RBP22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 MAB21L1Q13394 359 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 POM121L1PQ3SYA9 428 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 PXDC1Q5TGL8 231 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 GPR65Q8IYL9 337 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 LRRC20Q8TCA0 184 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 SNX11Q9Y5W9 270 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 C1orf226A1L170 272 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 MYL12BO14950 172 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 PROM1O43490 865 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 MYL12AP19105 171 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 SOAT1P35610 550 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 RAE1P78406 368 aaKnown RBP22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 WSCD2Q2TBF2 565 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 GGTA1PQ4G0N0 100 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 TRIQKQ629K1 86 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 HSDL2Q6YN16 418 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 CLDN22Q8N7P3 220 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 NUP50Q9UKX7 468 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 LRFN2Q9ULH4 789 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 TMCC3Q9ULS5 477 aa22.88■■□□□ 1.25
CSNK1E-203ENST00000396832 PLXNB3Q9ULL4 1909 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 FAM240BA0A1B0GVZ2 78 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 RRAS2P62070 204 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 POU6F2P78424 691 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 MEF2AQ02078 507 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 GPR33Q49SQ1 333 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 WDR53Q7Z5U6 358 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 THOC6Q86W42 341 aaKnown RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 LAS2Q8IYD9 372 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 DCAF4L2Q8NA75 395 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 UPRTQ96BW1 309 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 C2orf49Q9BVC5 232 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 TMEM161AQ9NX61 479 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 EIF3KQ9UBQ5 218 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms