RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ZC3H14Q6PJT7 736 aaKnown RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 PTOV1Q86YD1 416 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TCEAL3Q969E4 200 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 AMDHD1Q96NU7 426 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 GLIPR2Q9H4G4 154 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TPT1P8Q9HAU6 139 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 UTS2RQ9UKP6 389 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 HCN4Q9Y3Q4 1203 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 PCDHGB2Q9Y5G2 931 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 B3GALT2O43825 422 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 ANKRD34CP0C6C1 535 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 ALDH9A1P49189 494 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 ABHD18Q0P651 414 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 AMZ1Q400G9 498 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 GOLM1Q8NBJ4 401 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 THUMPD3Q9BV44 507 aaKnown RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 GORASP2Q9H8Y8 452 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 COPS7BQ9H9Q2 264 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 R4GN57 208 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 GLOD5A6NK44 160 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 AQP12BA6NM10 295 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ANP32DO95626 131 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 SOX18P35713 384 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ATXN3P54252 364 aaPredicted RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 CCL7P80098 99 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 KCNAB1Q14722 419 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 CPZQ66K79 652 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 USP53Q70EK8 1073 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ARHGAP22Q7Z5H3 698 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 PROSER1Q86XN7 944 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 AQP12AQ8IXF9 295 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ZZZ3Q8IYH5 903 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 ECSITQ9BQ95 431 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 CCDC3Q9BQI4 270 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NLNQ9BYT8 704 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SPRTNQ9H040 489 aaPredicted RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 PIF1Q9H611 641 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 RPF2Q9H7B2 306 aaKnown RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 RP1P56715 2156 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NCK1P16333 377 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 FAM53BQ14153 422 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 RGNQ15493 299 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 GARNL3Q5VVW2 1013 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SAXO2Q658L1 398 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM52Q8NDY8 209 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 HIPK4Q8NE63 616 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 OR2T12Q8NG77 320 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 OR5T3Q8NGG3 340 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SLC26A7Q8TE54 656 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 WDR87Q6ZQQ6 2873 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 PRR33A8MZF0 331 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 TNFRSF21O75509 655 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NR2F6P10588 404 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ANPEPP15144 967 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 DDX5P17844 614 aaKnown RBP12□□□□□ -0.49
TRIM39-204ENST00000396548 UQCRC2P22695 453 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 OLR1P78380 273 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF750Q32MQ0 723 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 COX20Q5RI15 118 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 CYP2R1Q6VVX0 501 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 IFNEQ86WN2 208 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SPPL2CQ8IUH8 684 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NRG4Q8WWG1 115 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SLC35A5Q9BS91 424 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 SPATA9Q9BWV2 254 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 ASPSCR1Q9BZE9 553 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 MS4A12Q9NXJ0 267 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 BCAP29Q9UHQ4 241 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 MAGEL2Q9UJ55 1249 aa12□□□□□ -0.49
TRIM39-204ENST00000396548 NUP210LQ5VU65 1888 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 NUP214P35658 2090 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 WDFY3Q8IZQ1 3526 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 H0Y3Z8 333 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 SGK494L7N484 410 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 FOLR1P15328 257 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF10P21506 573 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 PPIBP23284 216 aaKnown RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 CDK9P50750 372 aaKnown RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 TCTE1Q5JU00 501 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 MICU2Q8IYU8 434 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 OR4D9Q8NGE8 314 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 STMN2Q93045 179 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 ZBED6CLQ96FA7 236 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-204ENST00000396548 LRRN3Q9H3W5 708 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
TRIM39-204ENST00000396548 GMEB2Q9UKD1 530 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms