RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 IPPKQ9H8X2 491 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 DMRT3Q9NQL9 472 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 DEPPQ9NTK1 212 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 SUCOQ9UBS9 1254 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 YARS2Q9Y2Z4 477 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 RNF11Q9Y3C5 154 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PLPP1O14494 284 aa17■□□□□ 0.31
FXN-203ENST00000396366 FGF17O60258 216 aa17■□□□□ 0.31
FXN-203ENST00000396366 ZNF354AO60765 605 aaPredicted RBP17■□□□□ 0.31
FXN-203ENST00000396366 OR6B1O95007 311 aa17■□□□□ 0.31
FXN-203ENST00000396366 PCBP2Q15366 365 aaKnown RBP eCLIP17■□□□□ 0.31
FXN-203ENST00000396366 CDSNQ15517 529 aa17■□□□□ 0.31
FXN-203ENST00000396366 CPSF6Q16630 551 aaKnown RBP eCLIP17■□□□□ 0.31
FXN-203ENST00000396366 TECRLQ5HYJ1 363 aa17■□□□□ 0.31
FXN-203ENST00000396366 LIPJQ5W064 366 aa17■□□□□ 0.31
FXN-203ENST00000396366 IL20RBQ6UXL0 311 aa17■□□□□ 0.31
FXN-203ENST00000396366 HSDL2Q6YN16 418 aa17■□□□□ 0.31
FXN-203ENST00000396366 C3P1Q6ZMU1 363 aa17■□□□□ 0.31
FXN-203ENST00000396366 Q6ZPB1 254 aaPredicted RBP17■□□□□ 0.31
FXN-203ENST00000396366 CCDC91Q7Z6B0 441 aa17■□□□□ 0.31
FXN-203ENST00000396366 OR14A16Q8NHC5 309 aa17■□□□□ 0.31
FXN-203ENST00000396366 SLC2A12Q8TD20 617 aa17■□□□□ 0.31
FXN-203ENST00000396366 SLC44A1Q8WWI5 657 aa17■□□□□ 0.31
FXN-203ENST00000396366 UCN3Q969E3 161 aa17■□□□□ 0.31
FXN-203ENST00000396366 RGMAQ96B86 450 aa17■□□□□ 0.31
FXN-203ENST00000396366 CDK15Q96Q40 435 aa17■□□□□ 0.31
FXN-203ENST00000396366 FUT8Q9BYC5 575 aa17■□□□□ 0.31
FXN-203ENST00000396366 MYOTQ9UBF9 498 aa17■□□□□ 0.31
FXN-203ENST00000396366 MTRF1LQ9UGC7 380 aaKnown RBP17■□□□□ 0.31
FXN-203ENST00000396366 KLF13Q9Y2Y9 288 aaPredicted RBP17■□□□□ 0.31
FXN-203ENST00000396366 ATG4BQ9Y4P1 393 aa17■□□□□ 0.31
FXN-203ENST00000396366 EML6Q6ZMW3 1958 aa17■□□□□ 0.31
FXN-203ENST00000396366 PINLYPA6NC86 204 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 HRKO00198 91 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 OR7A17O14581 309 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 HS6ST1O60243 411 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 EEDO75530 441 aaKnown RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 MLYCDO95822 493 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 ESRRAP11474 423 aaPredicted RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 PRF1P14222 555 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 SERPINB1P30740 379 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 SOX3P41225 446 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 PIK3CBP42338 1070 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 RAP1GDS1P52306 607 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 HK2P52789 917 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 CASP6P55212 293 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 HNRNPH2P55795 449 aaKnown RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 RNF4P78317 190 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 SERTAD2Q14140 314 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 ZNF750Q32MQ0 723 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 KLC3Q6P597 504 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 LURAP1LQ8IV03 231 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 GHDCQ8N2G8 530 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 PTGR2Q8N8N7 351 aaPredicted RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 DAZLQ92904 295 aaKnown RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 MARVELD3Q96A59 401 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 MTFMTQ96DP5 389 aaKnown RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 PHF21BQ96EK2 531 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 RASL10BQ96S79 203 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 PAFAH2Q99487 392 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 ZNF717Q9BY31 904 aaPredicted RBP16.99■□□□□ 0.31
FXN-203ENST00000396366 ADGRE2Q9UHX3 823 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 ERVK-11Q9UQG0 969 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 ENTPD4Q9Y227 616 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 SPACA6W5XKT8 324 aa16.99■□□□□ 0.31
FXN-203ENST00000396366 A0A0G2JMM0 328 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 A0A1W2PPB8 328 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 A0A1W2PRS3 328 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 KIR3DP1A8MWS1 328 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 POC1B-GALNT4F8VUJ3 575 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 G3V3Y1 287 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 H0YIV9 168 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 KLRC4-KLRK1H3BQV0 150 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 ABOP16442 354 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 MAGEA12P43365 314 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 ART3Q13508 389 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 FAM219BQ5XKK7 198 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 GPR180Q86V85 440 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 DOLPP1Q86YN1 238 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 ZNF808Q8N4W9 903 aaPredicted RBP16.98■□□□□ 0.31
FXN-203ENST00000396366 OR52B6Q8NGF0 335 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 WDR20Q8TBZ3 569 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 ZNF721Q8TF20 911 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 ASB15Q8WXK1 588 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 PHF12Q96QT6 1004 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 RPF2Q9H7B2 306 aaKnown RBP16.98■□□□□ 0.31
FXN-203ENST00000396366 NOL11Q9H8H0 719 aaKnown RBP16.98■□□□□ 0.31
FXN-203ENST00000396366 TIMMDC1Q9NPL8 285 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 MEMO1Q9Y316 297 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 TSC22D4Q9Y3Q8 395 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 PCDHGA11Q9Y5H2 935 aa16.98■□□□□ 0.31
FXN-203ENST00000396366 NCOA6Q14686 2063 aaPredicted RBP16.98■□□□□ 0.31
FXN-203ENST00000396366 APCP25054 2843 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 A0A1B0GTH9 108 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 CCDC189A1A4V9 331 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 GLOD5A6NK44 160 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 A8MVJ9 347 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 TFECO14948 347 aaPredicted RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 TMPRSS11DO60235 418 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 PDE9AO76083 593 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms