RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 NT5CQ8TCD5 201 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 GTF2H4Q92759 462 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ZHX1-C8orf76Q96EF9 292 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 EXOC2Q96KP1 924 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 NSUN5Q96P11 429 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 BARD1Q99728 777 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 P2RY13Q9BPV8 354 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ACPTQ9BZG2 426 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 PLA2G2FQ9BZM2 168 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 BTBD1Q9H0C5 482 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 NARFLQ9H6Q4 476 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ZDHHC6Q9H6R6 413 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 KAT8Q9H7Z6 458 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 IPPKQ9H8X2 491 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 EHD3Q9NZN3 535 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 SEMA5BQ9P283 1151 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ERVK-18Q9QC07 812 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 EIF2B4Q9UI10 523 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 PNMA8BQ9ULN7 279 aaPredicted RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 USP22Q9UPT9 525 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RUVBL1Q9Y265 456 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 PCDHGB6Q9Y5F9 930 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 STON1Q9Y6Q2 735 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 A0A1W2PQ72 361 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 EFCAB9A8MZ26 197 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 LOC730098B7Z3J9 87 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 PTGES3LE9PB15 166 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 H3BQ06 376 aaPredicted RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 AP3D1O14617 1153 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 DSCR3O14972 297 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 SLITRK5O94991 958 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CATP04040 527 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 ELFN1P0C7U0 828 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 KELP23276 732 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 HTR2BP41595 481 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 IL12RB1P42701 662 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 MAP2K4P45985 399 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 PRIM2P49643 509 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 WNT3P56703 355 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 DEFA1P59665 94 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 DEFA3P59666 94 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RAE1P78406 368 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 CDK3Q00526 305 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CCINQ13939 588 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 STARD3Q14849 445 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CST6Q15828 149 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TUSC1Q2TAM9 212 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TCEAL5Q5H9L2 206 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RABL3Q5HYI8 236 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TPRG1LQ5T0D9 272 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CPZQ66K79 652 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ERICH5Q6P6B1 374 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 STK32CQ86UX6 486 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ZDHHC13Q8IUH4 622 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 PLD3Q8IV08 490 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TDHQ8IZJ6 230 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 SVOPLQ8N434 492 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 AVL9Q8NBF6 648 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TTLQ8NG68 377 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 OR9A1PQ8NGU1 263 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 OR2L8Q8NGY9 312 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 SETD6Q8TBK2 473 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 PIK3R3Q92569 461 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RPL3LQ92901 407 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 OR4K3Q96R72 315 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 SEPHS2Q99611 448 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RBM4BQ9BQ04 359 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 RIOK2Q9BVS4 552 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 RBM4Q9BWF3 364 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 UGT2B28Q9BY64 529 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CCDC90BQ9GZT6 254 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RAB33BQ9H082 229 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 DCSTAMPQ9H295 470 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 NKX2-4Q9H2Z4 354 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TMEM38AQ9H6F2 299 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 ACOT13Q9NPJ3 140 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 RPRD1BQ9NQG5 326 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 ZSCAN32Q9NX65 697 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CCDC59Q9P031 241 aaKnown RBP5.12□□□□□ -1.59
VPS41-203ENST00000395969 NUP50Q9UKX7 468 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 MKLN1Q9UL63 735 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TBC1D24Q9ULP9 559 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 POLHQ9Y253 713 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 TRAPPC4Q9Y296 219 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 MTCH2Q9Y6C9 303 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 CENPFP49454 3210 aa5.12□□□□□ -1.59
VPS41-203ENST00000395969 A0A1W2PPV9 198 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 OR2A25A4D2G3 310 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 XPNPEP2O43895 674 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ZNF780AO75290 641 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 SIX3O95343 332 aaPredicted RBP5.11□□□□□ -1.59
VPS41-203ENST00000395969 TRIM16O95361 564 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 APOA1P02647 267 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 MSL3P1P0C860 447 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ITGAMP11215 1152 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 ITGA2P17301 1181 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 NDUFS1P28331 727 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 AHRP35869 848 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 KRT20P35900 424 aa5.11□□□□□ -1.59
VPS41-203ENST00000395969 SLC6A11P48066 632 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms