RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NEFHP12036 1026 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 SERPINB5P36952 375 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 RAE1P78406 368 aaKnown RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 ZNF33BQ06732 778 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 ACTN3Q08043 901 aaPredicted RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 SPDYAQ5MJ70 313 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 MMP21Q8N119 569 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 ANKRD9Q96BM1 317 aaPredicted RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 TUBB6Q9BUF5 446 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 EBPLQ9BY08 206 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 C20orf27Q9GZN8 174 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 RPF2Q9H7B2 306 aaKnown RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 PNO1Q9NRX1 252 aaKnown RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 ZNF446Q9NWS9 450 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 MS4A12Q9NXJ0 267 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 ZDHHC2Q9UIJ5 367 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 TUBD1Q9UJT1 453 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 TRAF6Q9Y4K3 522 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 DNAJC15Q9Y5T4 150 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 MED13Q9UHV7 2174 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 SMG1Q96Q15 3661 aaKnown RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 CTNSO60931 367 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 HSPA4LO95757 839 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 PRR35P0CG20 571 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 BUD31P41223 144 aaPredicted RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 MAPK12P53778 367 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 ACSM2AQ08AH3 577 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 MYBPC3Q14896 1274 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 BTBD16Q32M84 506 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 UGT3A2Q3SY77 523 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 ACSM2BQ68CK6 577 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 TRIM46Q7Z4K8 759 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 KBTBD2Q8IY47 623 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 OR2T11Q8NH01 316 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 TWIST2Q8WVJ9 160 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 NKIRAS1Q9NYS0 192 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 CCL27Q9Y4X3 112 aa18.66■□□□□ 0.58
SNCA-203ENST00000394986 PCDHGA9Q9Y5G4 932 aaKnown RBP18.66■□□□□ 0.58
SNCA-203ENST00000394986 PCDH7O60245 1069 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 SERPINA7P05543 415 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 LINC00032P0C843 101 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 ITGAMP11215 1152 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 TLX1P31314 330 aaPredicted RBP18.65■□□□□ 0.58
SNCA-203ENST00000394986 SOX8P57073 446 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 ABCE1P61221 599 aaKnown RBP18.65■□□□□ 0.58
SNCA-203ENST00000394986 FOLH1Q04609 750 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 STX4Q12846 297 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 DDIASQ8IXT1 998 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 CLYBLQ8N0X4 340 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 GOLGA6L1Q8N7Z2 621 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 LPAR4Q99677 370 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 ALOXE3Q9BYJ1 711 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 LHPPQ9H008 270 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 SLC25A18Q9H1K4 315 aa18.65■□□□□ 0.58
SNCA-203ENST00000394986 ZNF552Q9H707 407 aaPredicted RBP18.65■□□□□ 0.58
SNCA-203ENST00000394986 SCN2AQ99250 2005 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 SAGE2PA6NJ88 616 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 TMEM114B3SHH9 223 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 PIP5K1BO14986 540 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 PGRMC2O15173 223 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 SKAP2O75563 359 aaPredicted RBP18.64■□□□□ 0.57
SNCA-203ENST00000394986 MYO1DO94832 1006 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 CHEK2O96017 543 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 FGF4P08620 206 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 PGDP52209 483 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 SLC18A1P54219 525 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 SLC26A5P58743 744 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 BST1Q10588 318 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 LACTB2Q53H82 288 aaPredicted RBP18.64■□□□□ 0.57
SNCA-203ENST00000394986 SPIN4Q56A73 249 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 NDUFAF5Q5TEU4 345 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 PLAG1Q6DJT9 500 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 TCTN3Q6NUS6 607 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 SIRT6Q8N6T7 355 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 ZNF781Q8N8C0 355 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 LSM14AQ8ND56 463 aaKnown RBP18.64■□□□□ 0.57
SNCA-203ENST00000394986 BRIX1Q8TDN6 353 aaKnown RBP18.64■□□□□ 0.57
SNCA-203ENST00000394986 TM4SF18Q96CE8 201 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 ZBTB20Q9HC78 741 aaPredicted RBP18.64■□□□□ 0.57
SNCA-203ENST00000394986 MCM8Q9UJA3 840 aa18.64■□□□□ 0.57
SNCA-203ENST00000394986 A0A1W2PS29 197 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 BLACEA4D250 179 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 RSL1D1O76021 490 aaKnown RBP18.63■□□□□ 0.57
SNCA-203ENST00000394986 IFNA16P05015 189 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 TIA1P31483 386 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNCA-203ENST00000394986 SLC1A6P48664 564 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 STX3Q13277 289 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 COLEC12Q5KU26 742 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 Q6ZSR9 355 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 ASB18Q6ZVZ8 466 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 PTRH1Q86Y79 214 aaKnown RBP18.63■□□□□ 0.57
SNCA-203ENST00000394986 PSMF1Q92530 271 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 C11orf24Q96F05 449 aaPredicted RBP18.63■□□□□ 0.57
SNCA-203ENST00000394986 SORT1Q99523 831 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 WDR41Q9HAD4 459 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 C5AR2Q9P296 337 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 GIMAP2Q9UG22 337 aa18.63■□□□□ 0.57
SNCA-203ENST00000394986 G3BP2Q9UN86 482 aaKnown RBP18.63■□□□□ 0.57
SNCA-203ENST00000394986 POLR3HQ9Y535 204 aaPredicted RBP18.63■□□□□ 0.57
SNCA-203ENST00000394986 BOD1L1Q8NFC6 3051 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms