RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OLIG3Q7RTU3 272 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLC46A3Q7Z3Q1 461 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 TFGQ92734 400 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 ZBED6CLQ96FA7 236 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 COQ7Q99807 217 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLC22A4Q9H015 551 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SRRDQ9UH36 339 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 NUFIP1Q9UHK0 495 aaKnown RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 MBD1Q9UIS9 605 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 MRPS23Q9Y3D9 190 aaKnown RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 METTL15A6NJ78 407 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 AP3D1O14617 1153 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 WBP4O75554 376 aaKnown RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CD160O95971 181 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PCGF2P35227 344 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 COX10Q12887 443 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 L3MBTL4Q8NA19 623 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 OR9A1PQ8NGU1 263 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SUSD6Q92537 303 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLC35G5Q96KT7 338 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLIRPQ9GZT3 109 aaKnown RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 IGFBP1P08833 259 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 INHBBP09529 407 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 C1SP09871 688 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLC2A2P11168 524 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-203ENST00000394536 RHCEP18577 417 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CHMP24386 653 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CSNK1DP48730 415 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 TLE2Q04725 743 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 LCN1P1Q5VSP4 162 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 PLAG1Q6DJT9 500 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 C6orf120Q7Z4R8 191 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 OR8J2Q8NGG1 315 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 BTN2A2Q8WVV5 523 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 OMA1Q96E52 524 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 YIPF6Q96EC8 236 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 SLC6A16Q9GZN6 736 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CLEC2DQ9UHP7 191 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 CARD8Q9Y2G2 431 aa15.42■□□□□ 0.06
PCDH1-203ENST00000394536 TMEM221A6NGB7 291 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 ANHXE9PGG2 379 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 M0R3H8 397 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 FZD6O60353 706 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 PCCBP05166 539 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 PIK3CBP42338 1070 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 NCBP2P52298 156 aaKnown RBP eCLIP15.41■□□□□ 0.06
PCDH1-203ENST00000394536 RGS8P57771 180 aaPredicted RBP15.41■□□□□ 0.06
PCDH1-203ENST00000394536 GRHL2Q6ISB3 625 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 GALNT13Q8IUC8 556 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF480Q8WV37 535 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 SPATA5L1Q9BVQ7 753 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 FAIM2Q9BWQ8 316 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 MND1Q9BWT6 205 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 CWH43Q9H720 699 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 CCL27Q9Y4X3 112 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 RBBP4Q09028 425 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 FADDQ13158 208 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 SELENBP1Q13228 472 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 C17orf62Q9BQA9 187 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 WACQ9BTA9 647 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 HDHD5Q9BXW7 423 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 SEC14L4Q9UDX3 406 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 ADAM30Q9UKF2 790 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 BACE2Q9Y5Z0 518 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 A0A1W2PQL4 384 aaPredicted RBP15.41■□□□□ 0.06
PCDH1-203ENST00000394536 RB1P06400 928 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 ZNF30P17039 623 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 JUNDP17535 347 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 CAV3P56539 151 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 DUSP7Q16829 419 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 MSANTD1Q6ZTZ1 278 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 LUZP2Q86TE4 346 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 FLCNQ8NFG4 579 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 SPRTNQ9H040 489 aaPredicted RBP15.41■□□□□ 0.06
PCDH1-203ENST00000394536 RACGAP1Q9H0H5 632 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 HCFC1R1Q9NWW0 138 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 IL36AQ9UHA7 158 aa15.41■□□□□ 0.06
PCDH1-203ENST00000394536 ISM1B1AKI9 464 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 SLC16A5O15375 505 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 HOXC8P31273 242 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 SDC2P34741 201 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 RNF144AP50876 292 aaPredicted RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CRISP3P54108 245 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CAP1Q01518 475 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 TEAD2Q15562 447 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 PLEKHM3Q6ZWE6 761 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CALHM3Q86XJ0 350 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 MMP21Q8N119 569 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 ASCC1Q8N9N2 400 aaKnown RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 DOK4Q8TEW6 326 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 ELAC1Q9H777 363 aaKnown RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 FBXO8Q9NRD0 319 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 BTNL2Q9UIR0 455 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 FBXO10Q9UK96 956 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CMAHPQ9Y471 501 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 PARP14Q460N5 1801 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 TRBV4-1A0A0J9YWV2 114 aa15.4■□□□□ 0.06
PCDH1-203ENST00000394536 CPSF4LA6NMK7 179 aaKnown RBP15.4■□□□□ 0.06
PCDH1-203ENST00000394536 FRS3O43559 492 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms