RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FAF1Q9UNN5 650 aaPredicted RBP8.18□□□□□ -1.1
TDP1-203ENST00000393454 ZNF780BQ9Y6R6 833 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
TDP1-203ENST00000393454 TNRC6BQ9UPQ9 1833 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 FAM149AA5PLN7 773 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CASQ2O14958 399 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 NUDT21O43809 227 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 SERPINA1P01009 418 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 MT-ND1P03886 318 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 SMIM10L1P0DMW3 83 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 NR2F6P10588 404 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 GLB1P16278 677 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 FASP25445 335 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 EPHA8P29322 1005 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 TLX1P31314 330 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 FEN1P39748 380 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 ARL4DP49703 201 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CDK9P50750 372 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 LIM2P55344 173 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 RUNX2Q13950 521 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZNF750Q32MQ0 723 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 LRRC23Q53EV4 343 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 SNAP47Q5SQN1 464 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 MANEAQ5SRI9 462 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TMEM214Q6NUQ4 689 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 SLC48A1Q6P1K1 146 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ENPP6Q6UWR7 440 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 USP53Q70EK8 1073 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CCDC116Q8IYX3 515 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DNAJC22Q8N4W6 341 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 OR52N2Q8NGI0 321 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZFP28Q8NHY6 868 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 MAL2Q969L2 176 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 EME1Q96AY2 570 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 SMIM10Q96HG1 83 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 MAGED4Q96JG8 741 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 SPATA9Q9BWV2 254 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 UGT2B28Q9BY64 529 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 GLIPR2Q9H4G4 154 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 NEUROD4Q9HD90 331 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ACSS1Q9NUB1 689 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 FBXO4Q9UKT5 387 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CLCA2Q9UQC9 943 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 NAALAD2Q9Y3Q0 740 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 SCN2AQ99250 2005 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 PCDH15Q96QU1 1955 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 IGHV1OR21-1A0A087WYE8 117 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 IGHV5-51A0A0C4DH38 117 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 A0A1B0GTQ1 180 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TLCD2A6NGC4 264 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TXNDC9O14530 226 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DUX1O43812 170 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DNAJB6O75190 326 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 PRKD3O94806 890 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZNF682O95780 498 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CTSBP07858 339 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ALPPL2P10696 532 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 FCGR1AP12314 374 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 PTGER1P34995 402 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CCT3P49368 545 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 TNFRSF17Q02223 184 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TP53BP2Q13625 1128 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 C16orf72Q14CZ0 275 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ADRM1Q16186 407 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 LPAL2Q16609 132 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 GCNT6Q5T4J0 391 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 OGFRL1Q5TC84 451 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 HMBOX1Q6NT76 420 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 PRSS41Q7RTY9 318 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 C6orf120Q7Z4R8 191 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 PTOV1Q86YD1 416 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZC3H7AQ8IWR0 971 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 KBTBD2Q8IY47 623 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 C11orf65Q8NCR3 313 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CATSPER1Q8NEC5 780 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 SLC47A1Q96FL8 570 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 AMDHD1Q96NU7 426 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ZNF184Q99676 751 aaPredicted RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 DUSP23Q9BVJ7 150 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 TRIM4Q9C037 500 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 GAREM1Q9H706 876 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ANKHQ9HCJ1 492 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 PDE7BQ9NP56 450 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DCAF13Q9NV06 445 aaKnown RBP8.17□□□□□ -1.1
TDP1-203ENST00000393454 NLGN3Q9NZ94 848 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 CES1P1Q9UKY3 287 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 DAPP1Q9UN19 280 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 LRRC42Q9Y546 428 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
TDP1-203ENST00000393454 ADAMTS9Q9P2N4 1935 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 CPED1A4D0V7 1026 aa8.16□□□□□ -1.1
TDP1-203ENST00000393454 MYO1GB0I1T2 1018 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms