RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 OTUB2Q96DC9 234 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 AMBRA1Q9C0C7 1298 aa10.08□□□□□ -0.8
CALD1-203ENST00000393118 ZFC3H1O60293 1989 aaKnown RBP10.08□□□□□ -0.8
CALD1-203ENST00000393118 A0A1W2PRG6 482 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CACNB4O00305 520 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 TSPAN19P0C672 248 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 PCSK2P16519 638 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 IRS1P35568 1242 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ADARB1P78563 741 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 SELENBP1Q13228 472 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 L3MBTL4Q8NA19 623 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 KBTBD8Q8NFY9 601 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 C16orf78Q8WTQ4 265 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 FAM129BQ96TA1 746 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 MACROD1Q9BQ69 325 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 POLR2J3Q9H1A7 115 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 IL23AQ9NPF7 189 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 NINQ8N4C6 2090 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ATG2BQ96BY7 2078 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 MYOFQ9NZM1 2061 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 MYO16Q9Y6X6 1858 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 A0A1W2PP55 124 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CSF2P04141 144 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 HSD3B1P14060 373 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ZNF8P17098 575 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 FSHRP23945 695 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 HSD3B2P26439 372 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 FEN1P39748 380 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 TAS2R41P59536 307 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 PPP2R2BQ00005 443 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ZC3H12BQ5HYM0 836 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 TPRG1LQ5T0D9 272 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TRIQKQ629K1 86 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ANKRD33Q7Z3H0 272 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 SMPDL3AQ92484 453 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 LRIG1Q96JA1 1093 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 SLC35G5Q96KT7 338 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TMEM245Q9H330 911 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CXXC1Q9P0U4 656 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 HCFC2Q9Y5Z7 792 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 HEPACAM2A8MVW5 462 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ZNF701M0R085 212 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 SULT1C4O75897 302 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 OR7A10O76100 309 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 KCNK5O95279 499 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CYP17A1P05093 508 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 GDI1P31150 447 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 SLC14A1Q13336 389 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 LASP1Q14847 261 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 OXA1LQ15070 435 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 INAVAQ3KP66 663 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TIMM50Q3ZCQ8 353 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 RPS26P11Q5JNZ5 115 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CCDC115Q96NT0 180 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CCDC3Q9BQI4 270 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 C1QTNF7Q9BXJ2 289 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 C1orf105O95561 183 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 STSP08842 583 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 RAB25P57735 213 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 CLCA4Q14CN2 919 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 PLET1Q6UQ28 207 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 ADIPOR2Q86V24 386 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 DTD2Q96FN9 168 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TEFMQ96QE5 360 aaKnown RBP10.07□□□□□ -0.8
CALD1-203ENST00000393118 DNAJC27Q9NZQ0 273 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 KLHL42Q9P2K6 505 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 TBX21Q9UL17 535 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 POFUT2Q9Y2G5 429 aa10.07□□□□□ -0.8
CALD1-203ENST00000393118 NDUFS4O43181 175 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ACPPP15309 386 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 PSMB5P28074 263 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 SLC15A1P46059 708 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 METAP1P53582 386 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 EMX1Q04741 257 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 ST3GAL4Q11206 333 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 LRRC32Q14392 662 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ZNF630Q2M218 657 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 BHLHB9Q6PI77 547 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 DPPA4Q7L190 304 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
CALD1-203ENST00000393118 MSRB3Q8IXL7 192 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 NDNFQ8TB73 568 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 LCN9Q8WX39 176 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 SNAPC3Q92966 411 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 RGMAQ96B86 450 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 MCCC1Q96RQ3 725 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 MKRN2Q9H000 416 aaKnown RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 MRPS30Q9NP92 439 aaKnown RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 ZNF780BQ9Y6R6 833 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 PIKFYVEQ9Y2I7 2098 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms