RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 B3GNT8Q7Z7M8 397 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 OR2L2Q8NH16 312 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 WDR48Q8TAF3 677 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 ASB16Q96NS5 453 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 ACAT2Q9BWD1 397 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 NLNQ9BYT8 704 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 TAS2R9Q9NYW1 312 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 UGT2A1Q9Y4X1 527 aa9.21□□□□□ -0.93
COL6A3-204ENST00000392003 MTCL1Q9Y4B5 1905 aaKnown RBP9.21□□□□□ -0.93
COL6A3-204ENST00000392003 C5orf58C9J3I9 102 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 K7ESM1 405 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 RFXAPO00287 272 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 DPM1O60762 260 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 OPN1SWP03999 348 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 SEMG1P04279 462 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 HTR1AP08908 422 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 FURINP09958 794 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 CD247P20963 164 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 SERPINB10P48595 397 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 SLC9A3P48764 834 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 CDK6Q00534 326 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 SPIBQ01892 262 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MVKQ03426 396 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 EMX1Q04741 257 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ZNF385BQ569K4 471 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ERN2Q76MJ5 926 aaKnown RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 AMZ2Q86W34 360 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 METTL4Q8N3J2 472 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 C2orf73Q8N5S3 287 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 NFKBIDQ8NI38 313 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ST8SIA2Q92186 375 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ZNF486Q96H40 463 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 NELL2Q99435 816 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MYOCQ99972 504 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ENPP5Q9UJA9 477 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 PADI2Q9Y2J8 665 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MAP4K5Q9Y4K4 846 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MAN1A2O60476 641 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MRPS14O60783 128 aaKnown RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ANXA8P13928 327 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 JUNDP17535 347 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 HTR1BP28222 390 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 METAP1P53582 386 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 KCNJ10P78508 379 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MC1RQ01726 317 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 DPTQ07507 201 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 MAD2L1BPQ15013 274 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 ZNF630Q2M218 657 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 C9orf64Q5T6V5 341 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 TANGO2Q6ICL3 276 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 GPR155Q7Z3F1 870 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 DCUN1D3Q8IWE4 304 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 LMNTD1Q8N9Z9 388 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 LINC00615Q96LM1 132 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 KXD1Q9BQD3 176 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 BCL7BQ9BQE9 202 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 DZANK1Q9NVP4 752 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 GDE1Q9NZC3 331 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 NDRG4Q9ULP0 352 aaKnown RBP9.21□□□□□ -0.94
COL6A3-204ENST00000392003 NAALAD2Q9Y3Q0 740 aa9.21□□□□□ -0.94
COL6A3-204ENST00000392003 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 BCAS1O75363 584 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 GDI1P31150 447 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 RAB15P59190 212 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 GNG2P59768 71 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 GALK2Q01415 458 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 ZNF234Q14588 700 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 DUSP6Q16828 381 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 PROX2Q3B8N5 592 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 IER5LQ5T953 404 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 LAIR2Q6ISS4 152 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 LCTLQ6UWM7 567 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 PAGE2Q7Z2X7 111 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 BTLAQ7Z6A9 289 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 P2RY8Q86VZ1 359 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 SLC30A8Q8IWU4 369 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 RAB42Q8N4Z0 105 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 OR10G2Q8NGC3 310 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 FBLIM1Q8WUP2 373 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 TFGQ92734 400 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 TOE1Q96GM8 510 aaKnown RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 C7orf34Q96L11 122 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 QRFPRQ96P65 431 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 IL17FQ96PD4 163 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 WACQ9BTA9 647 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 DUSP21Q9H596 190 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 EPS8L2Q9H6S3 715 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 YBX2Q9Y2T7 364 aaKnown RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 PCDHGB1Q9Y5G3 927 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 DGKBQ9Y6T7 804 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 SLC22A1O15245 554 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 FADS2O95864 444 aaKnown RBP9.2□□□□□ -0.94
COL6A3-204ENST00000392003 SOD1P00441 154 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 MT-ND2P03891 347 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 CDH12P55289 794 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 SLC35A2P78381 396 aa9.2□□□□□ -0.94
COL6A3-204ENST00000392003 RPA4Q13156 261 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms