RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 CPEB2Q7Z5Q1 589 aaKnown RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMCO2Q7Z6W1 182 aaPredicted RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 LUZP1Q86V48 1076 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 NR2C2APQ86WQ0 139 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 COMMD2Q86X83 199 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 UEVLDQ8IX04 471 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ADGRF4Q8IZF3 695 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC38A6Q8IZM9 456 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 DSELQ8IZU8 1212 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM123Q8N131 208 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLIP4Q8N3C7 705 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 AADATQ8N5Z0 425 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 CPSF7Q8N684 471 aaKnown RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 LRTM2Q8N967 370 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF397Q8NF99 534 aaPredicted RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ATP8B4Q8TF62 1192 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 RLN3Q8WXF3 142 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 IRGQQ8WZA9 623 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 PHYHIPQ92561 330 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 KAT2BQ92831 832 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 GLYATL1Q969I3 302 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 NCLNQ969V3 563 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM45BQ96B21 275 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 RAB39BQ96DA2 213 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 THOC1Q96FV9 657 aaKnown RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 CXorf58Q96LI9 332 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TSSK2Q96PF2 358 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 DEFB118Q96PH6 123 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR1F2PQ96R84 312 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 MTERF1Q99551 399 aaKnown RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 GPA33Q99795 319 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC39A3Q9BRY0 314 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ALKBH7Q9BT30 221 aaPredicted RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM43Q9BTV4 400 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 FICDQ9BVA6 458 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 NUSAP1Q9BXS6 441 aaKnown RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 FTHL17Q9BXU8 183 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 STRADBQ9C0K7 418 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 NEUROG2Q9H2A3 272 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLSTN2Q9H4D0 955 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 AZI2Q9H6S1 392 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 WDR76Q9H967 626 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ELOVL3Q9HB03 270 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 SDF2L1Q9HCN8 221 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 APMAPQ9HDC9 416 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 GSN-AS1Q9NRJ2 163 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 NRBP2Q9NSY0 501 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM51Q9NW97 253 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 MIOSQ9NXC5 875 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 MIS18AQ9NYP9 233 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR6C2Q9NZP2 312 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 C1RLQ9NZP8 487 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 TXNDC16Q9P2K2 825 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 GAGE2DQ9UEU5 116 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 ERRFI1Q9UJM3 462 aaPredicted RBP1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 FBXL2Q9UKC9 423 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 EMCNQ9ULC0 261 aa1.95□□□□□ -2.1
SNORA40.19-201ENST00000390846 PDS5AQ29RF7 1337 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ATP6AP2A0A1C7CYW4 349 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 FAM149AA5PLN7 773 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 SERINC4A6NH21 518 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 GABRR3A8MPY1 467 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF732B4DXR9 585 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM150CB9EJG8 249 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 E5RGE8 158 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 H0Y8G0 127 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ARPC3O15145 178 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ALOX15BO15296 676 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 EIF3HO15372 352 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 POLR2DO15514 142 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 RRP8O43159 456 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 LRRTM2O43300 516 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF208O43345 1280 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 BUB1O43683 1085 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 EXTL3O43909 919 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 UPK3AO75631 287 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 LUC7L3O95232 432 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 PAPSS2O95340 614 aaPredicted RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 POP4O95707 220 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 C9P02748 559 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CRYGCP07315 174 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 RRASP10301 218 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 RALAP11233 206 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ENO3P13929 434 aaPredicted RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF18P17022 549 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 GNLYP22749 145 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 HTR2AP28223 471 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CSTF2P33240 577 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CAPGP40121 348 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CCT6AP40227 531 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 RASSF2P50749 326 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLCN4P51793 760 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 VAMP7P51809 220 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 THOP1P52888 689 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 SUCLG1P53597 346 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 VCPP55072 806 aaKnown RBP1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLDN8P56748 225 aa1.94□□□□□ -2.1
SNORA40.19-201ENST00000390846 SEC61GP60059 68 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms