RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 RHBDL3P58872 404 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 COL9A2Q14055 689 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 TRAM2Q15035 370 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 TGFBIQ15582 683 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 KCTD18Q6PI47 426 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 PDZD9Q8IXQ8 264 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 SLC41A3Q96GZ6 507 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 CNTNAP3BQ96NU0 1288 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 EFCAB11Q9BUY7 163 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 SLC7A8Q9UHI5 535 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 LRRC42Q9Y546 428 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ZNF860A6NHJ4 632 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 TMEM233B4DJY2 109 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 MMP20O60882 483 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 STK17BO94768 372 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ATG12O94817 140 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ELK4P28324 431 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 POU6F2P78424 691 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 RUNX2Q13950 521 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.65□□□□□ -1.51
RFX3-204ENST00000382004 UNKLQ9H9P5 680 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 FAIMQ9NVQ4 179 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 SRRDQ9UH36 339 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 SARDHQ9UL12 918 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 AGPAT2O15120 278 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 B4GALT4O60513 344 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 C6P13671 934 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 OXTRP30559 389 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 SNRPD2P62316 118 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 NNATQ16517 81 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ASRGL1Q7L266 308 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ZNF572Q7Z3I7 529 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 OR2M4Q96R27 311 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 CDC6Q99741 560 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 RETREG1Q9H6L5 497 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 PLCXD1Q9NUJ7 323 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 H0Y8G0 127 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 MEIS2O14770 477 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 POP7O75817 140 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 PAK4O96013 591 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 AOC1P19801 751 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 MAP2K4P45985 399 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 MAP2K3P46734 347 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 CAV2P51636 162 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 UBE2NP61088 152 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 AWAT2Q6E213 333 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 C22orf42Q6IC83 251 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 LYSMD3Q7Z3D4 306 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 REM2Q8IYK8 340 aaPredicted RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 IL17RCQ8NAC3 791 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 DENND1AQ8TEH3 1009 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 TMEM234Q8WY98 164 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 ASB9Q96DX5 294 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 TGM7Q96PF1 710 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 YTHDF1Q9BYJ9 559 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 STRADBQ9C0K7 418 aa5.65□□□□□ -1.51
RFX3-204ENST00000382004 RPF2Q9H7B2 306 aaKnown RBP5.65□□□□□ -1.51
RFX3-204ENST00000382004 COL1A2P08123 1366 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 MYBPHLA2RUH7 354 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 KNG1P01042 644 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ADORA3P0DMS8 318 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ACRP10323 421 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ADH5P11766 374 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 SLC2A5P22732 501 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 PTH2RP49190 550 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 SIRPB2Q5JXA9 342 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 GOLGA7Q7Z5G4 137 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 IGFN1Q86VF2 1251 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 NPAS4Q8IUM7 802 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 FTMTQ8N4E7 242 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 IL22RA1Q8N6P7 574 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ST7LQ8TDW4 575 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 C10orf82Q8WW14 230 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ACTL8Q9H568 366 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 PPP4R1LQ9P1A2 415 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ABRACLQ9P1F3 81 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ACSL5Q9ULC5 683 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 SLC1A7O00341 560 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ARAFP10398 606 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 POLR2CP19387 275 aaPredicted RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 NRIP1P48552 1158 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 VSX2P58304 361 aaPredicted RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 RPS24P62847 133 aaKnown RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 GINS1Q14691 196 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 BCL2L15Q5TBC7 163 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 MBLAC2Q68D91 279 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 OR52W1Q6IF63 320 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 TICAM1Q8IUC6 712 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ZNF695Q8IW36 515 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 CCDC116Q8IYX3 515 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 ASCC1Q8N9N2 400 aaKnown RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 OR9K2Q8NGE7 335 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 C16orf78Q8WTQ4 265 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 DCUN1D4Q92564 292 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 INPP4AQ96PE3 977 aaPredicted RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 SECISBP2Q96T21 854 aaKnown RBP5.64□□□□□ -1.51
RFX3-204ENST00000382004 PDCD1LG2Q9BQ51 273 aa5.64□□□□□ -1.51
RFX3-204ENST00000382004 POTEKPQ9BYX7 375 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms