RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SUSD6Q92537 303 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 TPD52L3Q96J77 140 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RNF170Q96K19 258 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 AMBNQ9NP70 447 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RPRD1BQ9NQG5 326 aaKnown RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 MAPRE3Q9UPY8 281 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 PCDHB11Q9Y5F2 797 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 V9GYH0 126 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 LRRK1Q38SD2 2015 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 IQCMA0A1B0GVH7 501 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CCDC182A6NF36 153 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 LINC01565O15544 149 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SEC14L5O43304 696 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SLCO2B1O94956 709 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SCG5P05408 212 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HIST1H2AGP0C0S8 130 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HIST1H2ADP20671 130 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 TACR1P25103 407 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ERP29P30040 261 aaKnown RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 PCGF2P35227 344 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HNMTP50135 292 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 GALK2Q01415 458 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RHAGQ02094 409 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HYAL1Q12794 435 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 MED22Q15528 200 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 TIGD3Q6B0B8 471 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 MBOAT1Q6ZNC8 495 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF621Q6ZSS3 439 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SLC44A2Q8IWA5 706 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-202ENST00000381990 CACTIN-AS1Q8N1I8 211 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 RASGEF1AQ8N9B8 481 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HIST1H2AHQ96KK5 128 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 HIST1H2AJQ99878 128 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 H2AFJQ9BTM1 129 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 MS4A12Q9NXJ0 267 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF226Q9NYT6 803 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SATB2Q9UPW6 733 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 SNX8Q9Y5X2 465 aa8.54□□□□□ -1.04
GPNMB-202ENST00000381990 OR2AG2A6NM03 316 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 RFXAPO00287 272 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 RGS5O15539 181 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SCN2BO60939 215 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ATG13O75143 517 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ALPPP05187 535 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ADRB3P13945 408 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 AMD1P17707 334 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 PRLHRP49683 370 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 AP1S2P56377 157 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 RACK1P63244 317 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SELENOWP63302 87 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 LRRC74AQ0VAA2 488 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 TSTQ16762 297 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 MICAQ29983 383 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF648Q5T619 568 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 PLAG1Q6DJT9 500 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SIGIRRQ6IA17 410 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 NOXRED1Q6NXP6 359 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ZNF438Q7Z4V0 828 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 RASGRP3Q8IV61 690 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 TCTE3Q8IZS6 198 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 C1orf52Q8N6N3 182 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 L3MBTL4Q8NA19 623 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 METTL2AQ96IZ6 378 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 MYADMQ96S97 322 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 MAPKAP1Q9BPZ7 522 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 KCNS3Q9BQ31 491 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 CCM2Q9BSQ5 444 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 PLA2G2FQ9BZM2 168 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SRRQ9GZT4 340 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 TPT1P8Q9HAU6 139 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ACOXLQ9NUZ1 547 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 NDUFAF4Q9P032 175 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 THAP10Q9P2Z0 257 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 DUSP12Q9UNI6 340 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 DENND4AQ7Z401 1863 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 C1QTNF3-AMACRE9PGA6 284 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 KAT7O95251 611 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 CRYZL1O95825 349 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 PSMA1P25786 263 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 IL12RB1P42701 662 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 NUDT6P53370 316 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 CTSCP53634 463 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 P2RX3P56373 397 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 CYP4F2P78329 520 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 TMEM115Q12893 351 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 TMEM52BQ4KMG9 183 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ATAT1Q5SQI0 421 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SNAP47Q5SQN1 464 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 Q6ZPB1 254 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 ERN2Q76MJ5 926 aaKnown RBP8.53□□□□□ -1.04
GPNMB-202ENST00000381990 GALNT10Q86SR1 603 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 NLRP8Q86W28 1048 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 RDH10Q8IZV5 341 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
GPNMB-202ENST00000381990 SLC5A8Q8N695 610 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms