RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 KNL1Q8NG31 2342 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 FFAR1O14842 300 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 NPC1O15118 1278 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 ENTPD6O75354 484 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 PSIP1O75475 530 aaKnown RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 RPS19P39019 145 aaKnown RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 OPRD1P41143 372 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 NFE2L1Q14494 772 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 C1orf53Q5VUE5 145 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 ZDHHC20Q5W0Z9 365 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 PAQR6Q6TCH4 344 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 CELF5Q8N6W0 485 aaKnown RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 GPR151Q8TDV0 419 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 ARRDC3Q96B67 414 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 OPALINQ96PE5 141 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 PIP5K1AQ99755 562 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 SPATA9Q9BWV2 254 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 FTSJ1Q9UET6 329 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 CORO2BQ9UQ03 480 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 A3GALT2U3KPV4 340 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 TRBC2A0A5B9 178 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 KPNA5O15131 536 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 KLHL18O94889 574 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CCNB2O95067 398 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF24P17028 368 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 HNF4AP41235 474 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC15A1P46059 708 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 HTRA4P83105 476 aaPredicted RBP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 EEF1A2Q05639 463 aaKnown RBP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 TMEM240Q5SV17 173 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 GET4Q7L5D6 327 aaPredicted RBP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CAMKMTQ7Z624 323 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 LSRQ86X29 649 aaPredicted RBP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 LAX1Q8IWV1 398 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 C7orf61Q8IZ16 206 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CEP19Q96LK0 163 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 DMRTB1Q96MA1 342 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 REEP4Q9H6H4 257 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 HHATLQ9HCP6 504 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 HCN4Q9Y3Q4 1203 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 NOX1Q9Y5S8 564 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SMIM30A4D0T7 59 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CBLP22681 906 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 PPIBP23284 216 aaKnown RBP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SOX6P35712 828 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 LIM2P55344 173 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 OR2B6P58173 313 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 TAS2R50P59544 299 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF763Q0D2J5 394 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SLCO4C1Q6ZQN7 724 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF367Q7RTV3 350 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 RASGRP3Q8IV61 690 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 OR52N2Q8NGI0 321 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC30A2Q9BRI3 323 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 BRF2Q9HAW0 419 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 DEC1Q9P2X7 70 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 BOLA1Q9Y3E2 137 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 LINC01553A4QN01 128 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 FAM47E-STBD1D6RA91 191 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CCRL2O00421 344 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SEMA7AO75326 666 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 STATHP02808 62 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 MMP12P39900 470 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 LIMS1P48059 325 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 CDC42P60953 191 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 MXD1Q05195 221 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 C2orf80Q0P641 193 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 PUM1Q14671 1186 aaKnown RBP eCLIP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 SPIN4Q56A73 249 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 AGAP6Q5VW22 663 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 AGAP4Q96P64 663 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 OR2A14Q96R47 310 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 WFDC6Q9BQY6 131 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 TMEM106CQ9BVX2 250 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 DYRK4Q9NR20 520 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 MOSPD1Q9UJG1 213 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 KLK4Q9Y5K2 254 aa15.49■□□□□ 0.07
NKX3-1-201ENST00000380871 POP7O75817 140 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 KLK1P06870 262 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 FURINP09958 794 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TBPL1P62380 186 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 SLBPQ14493 270 aaKnown RBP eCLIP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TAB1Q15750 504 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 BAK1Q16611 211 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TECPR1Q7Z6L1 1165 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF480Q8WV37 535 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TP53INP1Q96A56 240 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 ASPNQ9BXN1 380 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 THSD1Q9NS62 852 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 SNTG1Q9NSN8 517 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 KCNE2Q9Y6J6 123 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 XIRP2A4UGR9 3374 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PLXND1Q9Y4D7 1925 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 ZAR1LA6NP61 321 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 LRRTM2O43300 516 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 LATO43561 262 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 OLR1P78380 273 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 EIF4HQ15056 248 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 SEC23BQ15437 767 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms