RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 CCDC90BQ9GZT6 254 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 ANKRA2Q9H9E1 313 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 FGF22Q9HCT0 170 aa10.32□□□□□ -0.76
NEDD9-201ENST00000379433 PHPT1Q9NRX4 125 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-201ENST00000379433 TCRBV5S2A0A599 114 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 MITFO75030 526 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ADAM23O75077 832 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 DEAF1O75398 565 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 EIF2S1P05198 315 aaKnown RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 GPIP06744 558 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ELK4P28324 431 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NTSR1P30989 418 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 RAE1P78406 368 aaKnown RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 HPCAP84074 193 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 MERTKQ12866 999 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NEDD8Q15843 81 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NXPE4Q6UWF7 544 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 OR56A3Q8NH54 315 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 POC1BQ8TC44 478 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 RAB8BQ92930 207 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 PPCDCQ96CD2 204 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 OR52A5Q9H2C5 316 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 GLRX2Q9NS18 164 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 PADI4Q9UM07 663 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NEUROG3Q9Y4Z2 214 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 G3V2T6 193 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 PRAMEF10O60809 474 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ZBTB11O95625 1053 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 EML2O95834 649 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 C9P02748 559 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NR4A1P22736 598 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ACTR1BP42025 376 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ACTR1AP61163 376 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 FOXM1Q08050 763 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 C1orf61Q13536 156 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NADK2Q4G0N4 442 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 Q6ZS52 159 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NLRC3Q7RTR2 1065 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 NLRP8Q86W28 1048 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 PROSER1Q86XN7 944 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 DHRSXQ8N5I4 330 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 AVL9Q8NBF6 648 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 TSPAN14Q8NG11 270 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 RMND5BQ96G75 393 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-201ENST00000379433 TPSD1Q9BZJ3 242 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
NEDD9-201ENST00000379433 ARNTLO00327 626 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 IDH3BO43837 385 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 LCMT2O60294 686 aaKnown RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TNFAIP8O95379 198 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 POLR2CP19387 275 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 G0S2P27469 103 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SLC19A1P41440 591 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 MAN2A2P49641 1150 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TP53BP2Q13625 1128 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 MLC1Q15049 377 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 DUOXA1Q1HG43 343 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SPDYE7PQ495Y7 208 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 LIN52Q52LA3 116 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 PAGE2BQ5JRK9 111 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TSPYL5Q86VY4 417 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 HCAR2Q8TDS4 363 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TSPEARQ8WU66 669 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 MUS81Q96NY9 551 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 KCNH6Q9H252 994 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TRIT1Q9H3H1 467 aaKnown RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SEMA3GQ9NS98 782 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 DZANK1Q9NVP4 752 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ARMC1Q9NVT9 282 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RHCGQ9UBD6 479 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 FBXW2Q9UKT8 454 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ABCG2Q9UNQ0 655 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 NCOR1O75376 2440 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TCRBV21S2A2A0A5A6 115 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 PI15O43692 258 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RAP2AP10114 183 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 IL7RP16871 459 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TIA1P31483 386 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 HPCAL1P37235 193 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 MAPK12P53778 367 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RHAGQ02094 409 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 KCNC3Q14003 757 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 CYP2A13Q16696 494 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF750Q32MQ0 723 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 COQ5Q5HYK3 327 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TMEM179BQ7Z7N9 219 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 PDZD3Q86UT5 571 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RNF130Q86XS8 419 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 DCUN1D3Q8IWE4 304 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 LINC01555Q8NAE3 123 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 DHRS9Q9BPW9 319 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 OSBPL11Q9BXB4 747 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 NCOR1P1Q9H4R4 102 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 DMRT3Q9NQL9 472 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 CTPS2Q9NRF8 586 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 POLHQ9Y253 713 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 HEMK1Q9Y5R4 338 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms