RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LIX1Q8N485 282 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 TTLQ8NG68 377 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 OR2L5Q8NG80 312 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 DOK4Q8TEW6 326 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 SERINC2Q96SA4 455 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 COPS7AQ9UBW8 275 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 DAPP1Q9UN19 280 aa16.41■□□□□ 0.22
PDLIM4-202ENST00000379018 C15orf38-AP3S2A0A0A6YYH1 394 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 HSPB2A8KAH6 182 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 KDM4EB2RXH2 506 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 DVL2O14641 736 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 HCN1O60741 890 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 CTNSO60931 367 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 SH3BGRLO75368 114 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 TTC4O95801 387 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 RAF1P04049 648 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 FOSL1P15407 271 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 GNAZP19086 355 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 ADSLP30566 484 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 ASCL1P50553 236 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 RCN2Q14257 317 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 PPP1R7Q15435 360 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 HSPB2Q16082 182 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 MSS51Q4VC12 460 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 FBXO48Q5FWF7 155 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 TEDDM1Q5T9Z0 273 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 RNASEH2BQ5TBB1 312 aaKnown RBP16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 SLCO4C1Q6ZQN7 724 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 IGDCC3Q8IVU1 814 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 CNTN4Q8IWV2 1026 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 ULK2Q8IYT8 1036 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 NAXEQ8NCW5 288 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 TNIP2Q8NFZ5 429 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 TRIM58Q8NG06 486 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 OR5L2Q8NGL0 311 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 FAM222BQ8WU58 562 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 LRRC46Q96FV0 321 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 ZNF703Q9H7S9 590 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 VTI1BQ9UEU0 232 aa16.4■□□□□ 0.22
PDLIM4-202ENST00000379018 ETHE1O95571 254 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF37AP17032 561 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 EFTUD2Q15029 972 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 DEFB113Q30KQ7 82 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 ABHD17CQ6PCB6 329 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 SEM1Q6ZVN7 128 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 VN1R5Q7Z5H4 357 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 SNX31Q8N9S9 440 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 KIAA1191Q96A73 305 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 F2RL3Q96RI0 385 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 SH3GL2Q99962 352 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 MAPKAP1Q9BPZ7 522 aa16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 BOKQ9UMX3 212 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-202ENST00000379018 DNHD1Q96M86 4753 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 RTCAO00442 366 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 SYT5O00445 386 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 CLEC3AO75596 197 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 ATE1O95260 518 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 PEX19P40855 299 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 AGFG1P52594 562 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 POU4F3Q15319 338 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 TSNQ15631 228 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 HYAL4Q2M3T9 481 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 SLC22A10Q63ZE4 541 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 TRMT10BQ6PF06 316 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 CAMKMTQ7Z624 323 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 BIVMQ86UB2 503 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 OR4N5Q8IXE1 308 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 FBXW8Q8N3Y1 598 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 OR8K3Q8NH51 312 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 LINC01560Q8TB33 94 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 SLC22A8Q8TCC7 542 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF721Q8TF20 911 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 RNASE6Q93091 150 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 GAL3ST4Q96RP7 486 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 WWOXQ9NZC7 414 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 CTNNAL1Q9UBT7 734 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 MTRF1LQ9UGC7 380 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 ASIC3Q9UHC3 531 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 CHMP2BQ9UQN3 213 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 OARD1Q9Y530 152 aa16.38■□□□□ 0.21
PDLIM4-202ENST00000379018 VPS13CQ709C8 3753 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 TUBAL3A6NHL2 446 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 EEF1E1-BLOC1S5C9J1V9 151 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 EEF1E1O43324 174 aaKnown RBP16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 TBX6O95947 436 aaPredicted RBP16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 COX7A2P14406 83 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 GDF1P27539 372 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 TGM3Q08188 693 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 SERTAD2Q14140 314 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 PIGGQ5H8A4 983 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 TMEM198Q66K66 360 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 C9orf40Q8IXQ3 194 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 VWA5B2Q8N398 1253 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 NEIL3Q8TAT5 605 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 GRK7Q8WTQ7 553 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 ESAMQ96AP7 390 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 MBD6Q96DN6 1003 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 SPACA9Q96E40 222 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms