RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CCNG1P51959 295 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 HNRNPFP52597 415 aaKnown RBP17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 RBPJQ06330 500 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 ART3Q13508 389 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 DDX39BQ13838 428 aaKnown RBP17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 GALNTL5Q7Z4T8 443 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 C4orf33Q8N1A6 199 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 L3MBTL4Q8NA19 623 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM237Q96Q45 408 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 F2RL3Q96RI0 385 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 SEMA4BQ9NPR2 832 aaPredicted RBP17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 KCMF1Q9P0J7 381 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF223Q9UK11 482 aaPredicted RBP17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 DAPP1Q9UN19 280 aa17.64■□□□□ 0.41
TMEM88B-201ENST00000378821 A0A1B0GTL3 188 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 CLDN4O14493 209 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 SLC19A2O60779 497 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 SH3BGRLO75368 114 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 SLC25A12O75746 678 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 MLYCDO95822 493 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 PROCP04070 461 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 KRT4P19013 534 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 TSPAN8P19075 237 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 SERPINB1P30740 379 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ARL1P40616 181 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ST13P50502 369 aaKnown RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 CLCN2P51788 898 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 PLA2G16P53816 162 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 MTTPP55157 894 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 CDH13P55290 713 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 LIM2P55344 173 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 HERVK_113P63132 956 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ALDH6A1Q02252 535 aaKnown RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 OC90Q02509 493 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 CPSF6Q16630 551 aaKnown RBP eCLIP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 UNC50Q53HI1 259 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ZNF678Q5SXM1 525 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 MTFR2Q6P444 385 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 TRIM40Q6P9F5 258 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 UBE3DQ7Z6J8 389 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 LURAP1LQ8IV03 231 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 HUS1BQ8NHY5 278 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ATP6V1E2Q96A05 226 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 CCDC120Q96HB5 630 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 NTMT1Q9BV86 223 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ERVK-6Q9BXR3 956 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 DEFB126Q9BYW3 111 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 C12orf65Q9H3J6 166 aaKnown RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 PRM3Q9NNZ6 103 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 DMRT3Q9NQL9 472 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 PRTFDC1Q9NRG1 225 aa17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 KLF2Q9Y5W3 355 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 NCOA6Q14686 2063 aaPredicted RBP17.63■□□□□ 0.41
TMEM88B-201ENST00000378821 TRGV8A0A0C4DH27 118 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 H0YIV9 168 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 CCL21O00585 134 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 PPP6CO00743 305 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 FCHO1O14526 889 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 COPEO14579 308 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 CTNSO60931 367 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 MYO1DO94832 1006 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 SCELO95171 688 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 CLDN9O95484 217 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 TGFB1P01137 390 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 TUBBP07437 444 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 CRHR1P34998 444 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 FAM219BQ5XKK7 198 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 TRABD2AQ86V40 505 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 CHERPQ8IWX8 916 aaKnown RBP17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 FAM98AQ8NCA5 519 aaKnown RBP17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 WDR20Q8TBZ3 569 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 VMP1Q96GC9 406 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 MTERF1Q99551 399 aaKnown RBP17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 LYRM4Q9HD34 91 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 ADAP2Q9NPF8 381 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 MRPS33Q9Y291 106 aaKnown RBP17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 TSC22D4Q9Y3Q8 395 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 PCDHGA11Q9Y5H2 935 aa17.62■□□□□ 0.41
TMEM88B-201ENST00000378821 LRBAP50851 2863 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM200CA6NKL6 621 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 A8MUA0 341 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 G3V2L1 256 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ASNA1O43681 348 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 PLIN3O60664 434 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 CERS1P27544 350 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 PIK3CBP42338 1070 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 CCT5P48643 541 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 PRKAA2P54646 552 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 CLCQ05315 142 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TGM3Q08188 693 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 RCN2Q14257 317 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 TMEM35AQ53FP2 167 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 RNFT1Q5M7Z0 435 aa17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 SP5Q6BEB4 398 aaPredicted RBP17.61■□□□□ 0.41
TMEM88B-201ENST00000378821 ZYG11AQ6WRX3 759 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms