RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 C8orf4Q9NR00 106 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 DNAJB9Q9UBS3 223 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 CES1P1Q9UKY3 287 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 VCANP13611 3396 aa16.74■□□□□ 0.27
CTTN-203ENST00000376561 CACNA1IQ9P0X4 2223 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 SDC3O75056 442 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 ERAL1O75616 437 aaKnown RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 AQP1P29972 269 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 CRYBA2P53672 197 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 DEFB133Q30KQ1 61 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 WDR45BQ5MNZ6 344 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 TMEM214Q6NUQ4 689 aaKnown RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 SLC48A1Q6P1K1 146 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 TSSK4Q6SA08 328 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 C17orf82Q86X59 251 aaPredicted RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 SDR16C5Q8N3Y7 309 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 MARVELD2Q8N4S9 558 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 OSBPL11Q9BXB4 747 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 ASPSCR1Q9BZE9 553 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 UCK1Q9HA47 277 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 PADI4Q9UM07 663 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 EI24O14681 340 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 GCM2O75603 506 aaPredicted RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 EIF2S1P05198 315 aaKnown RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 UBTFL6P0CB48 400 aaPredicted RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 ST6GAL1P15907 406 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 NTSP30990 170 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 MAGEA2P43356 314 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 C21orf59P57076 290 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 SIM2Q14190 667 aaPredicted RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 PDK3Q15120 406 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
CTTN-203ENST00000376561 DEFB134Q4QY38 66 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 KLHL35Q6PF15 583 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 TMBIM1Q969X1 311 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
CTTN-203ENST00000376561 BBS4Q96RK4 519 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
CTTN-203ENST00000376561 LILRA5A6NI73 299 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ZSCAN9O15535 394 aaPredicted RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 B4GALT2O60909 372 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 NCBP2P52298 156 aaKnown RBP eCLIP16.72■□□□□ 0.275e-8■■□□□ 12.8
CTTN-203ENST00000376561 EEF1A2Q05639 463 aaKnown RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 BIRC2Q13490 618 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 BLMHQ13867 455 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 SCARB2Q14108 478 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 SPDYE7PQ495Y7 208 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ABHD13Q7L211 337 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 VTCN1Q7Z7D3 282 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 NFKBIDQ8NI38 313 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 TRAPPC9Q96Q05 1148 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 SLC38A3Q99624 504 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 CD320Q9NPF0 282 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 UCKL1Q9NWZ5 548 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 MAGEA13PA6NCF6 341 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 MYO1GB0I1T2 1018 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 DLGAP1O14490 977 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 PIAS2O75928 621 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 SEMG1P04279 462 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 CDH3P22223 829 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 CCT3P49368 545 aaKnown RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 DSTNP60981 165 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 CDK6Q00534 326 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 SPIDRQ14159 915 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ZNF630Q2M218 657 aaPredicted RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 MANEAQ5SRI9 462 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 OGFOD3Q6PK18 319 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 CEACAM20Q6UY09 585 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 C6orf120Q7Z4R8 191 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ZDHHC21Q8IVQ6 265 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ZNF655Q8N720 491 aaPredicted RBP16.72■□□□□ 0.27
CTTN-203ENST00000376561 ZFP28Q8NHY6 868 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 KLHL6Q8WZ60 621 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 HSH2DQ96JZ2 352 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 FAM60AQ9NP50 221 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 IL1RAPQ9NPH3 570 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 ENTPD4Q9Y227 616 aa16.72■□□□□ 0.27
CTTN-203ENST00000376561 PDGFBP01127 241 aaPredicted RBP16.71■□□□□ 0.27
CTTN-203ENST00000376561 ARAFP10398 606 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 NR2F6P10588 404 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 ALOX12P18054 663 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 ZNF10P21506 573 aaPredicted RBP16.71■□□□□ 0.27
CTTN-203ENST00000376561 HOXA6P31267 233 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 GPC1P35052 558 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 CAPZBP47756 277 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.27
CTTN-203ENST00000376561 MRPS35P82673 323 aaKnown RBP16.71■□□□□ 0.27
CTTN-203ENST00000376561 ZNF750Q32MQ0 723 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 TBPL2Q6SJ96 375 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 FKBP9P1Q75LS8 142 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 SUN3Q8TAQ9 357 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 N4BP2L2Q92802 583 aaPredicted RBP16.71■□□□□ 0.27
CTTN-203ENST00000376561 CNBD2Q96M20 576 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 KCMF1Q9P0J7 381 aa16.71■□□□□ 0.27
CTTN-203ENST00000376561 MRPS2Q9Y399 296 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms