RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 CPN2P22792 545 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 SERPINB1P30740 379 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 SSR2P43308 183 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 HK2P52789 917 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 RNF4P78317 190 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 DDX39BQ13838 428 aaKnown RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 ACAP2Q15057 778 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 PFKFB4Q16877 469 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 CMPK2Q5EBM0 449 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 KHDRBS2Q5VWX1 349 aaKnown RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 OR4C11Q6IEV9 310 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 MYLK4Q86YV6 388 aaPredicted RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 OR4N5Q8IXE1 308 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 ZFP62Q8NB50 900 aaPredicted RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 PSD4Q8NDX1 1056 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 HUS1BQ8NHY5 278 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 SLC2A12Q8TD20 617 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 RASL10BQ96S79 203 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 SORBS1Q9BX66 1292 aaKnown RBP13.22□□□□□ -0.29
NELFE-201ENST00000375425 DEPPQ9NTK1 212 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 ZDHHC18Q9NUE0 388 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 ADGRE2Q9UHX3 823 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 ANGPTL3Q9Y5C1 460 aa13.22□□□□□ -0.29
NELFE-201ENST00000375425 E9PLN8 166 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 ADAM10O14672 748 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 CDC40O60508 579 aaKnown RBP eCLIP13.21□□□□□ -0.3
NELFE-201ENST00000375425 PDE9AO76083 593 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 CLDN14O95500 239 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 ETHE1O95571 254 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 TUBB4AP04350 444 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 GFAPP14136 432 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 PTGS2P35354 604 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 SOX3P41225 446 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 UAP1Q16222 522 aaPredicted RBP13.21□□□□□ -0.3
NELFE-201ENST00000375425 LIPJQ5W064 366 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 CCDC91Q7Z6B0 441 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 OR52N2Q8NGI0 321 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 OR8K3Q8NH51 312 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 RGMAQ96B86 450 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 MTERF1Q99551 399 aaKnown RBP13.21□□□□□ -0.3
NELFE-201ENST00000375425 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 SNX15Q9NRS6 342 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 TACC2O95359 2948 aa13.21□□□□□ -0.3
NELFE-201ENST00000375425 GTF3C1Q12789 2109 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 ABCA12Q86UK0 2595 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 A0A096LPK6 155 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 LRRC14BA6NHZ5 514 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 FGF17O60258 216 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 KLHL2O95198 593 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 TPOP07202 933 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 COX6B1P14854 86 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 TYK2P29597 1187 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 PIK3CBP42338 1070 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 RAP1GDS1P52306 607 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 ZNF750Q32MQ0 723 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 ZNF721Q8TF20 911 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 PHF10Q8WUB8 498 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 PPWD1Q96BP3 646 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 MTFMTQ96DP5 389 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 RBM18Q96H35 190 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 GPR78Q96P69 363 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 DEFB127Q9H1M4 99 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 RPF2Q9H7B2 306 aaKnown RBP13.2□□□□□ -0.3
NELFE-201ENST00000375425 ACTR8Q9H981 624 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 PCDHGA11Q9Y5H2 935 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 HRH3Q9Y5N1 445 aa13.2□□□□□ -0.3
NELFE-201ENST00000375425 PINLYPA6NC86 204 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 H0YIV9 168 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 PLPP1O14494 284 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 KLK8O60259 260 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 ZNF354AO60765 605 aaPredicted RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 COX7A2P14406 83 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 PTX3P26022 381 aaPredicted RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 PHBP35232 272 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 STT3AP46977 705 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 NR0B1P51843 470 aaKnown RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 RPS13P62277 151 aaKnown RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
NELFE-201ENST00000375425 CPSF6Q16630 551 aaKnown RBP eCLIP13.19□□□□□ -0.3
NELFE-201ENST00000375425 UBAP2Q5T6F2 1119 aaKnown RBP13.19□□□□□ -0.3
NELFE-201ENST00000375425 C18orf63Q68DL7 685 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 ARHGAP11AQ6P4F7 1023 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms