RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MED28Q9H204 178 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SLC25A37Q9NYZ2 338 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 RAB23Q9ULC3 237 aa11.63□□□□□ -0.55
C9orf3-203ENST00000375315 KLF2Q9Y5W3 355 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-203ENST00000375315 SDK1Q7Z5N4 2213 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 IGLV3-10A0A075B6K4 115 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 INSIG1O15503 277 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 GPR39O43194 453 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 C9P02748 559 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MAN2A2P49641 1150 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 FLI1Q01543 452 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 FAM174BQ3ZCQ3 159 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 CXorf57Q6NSI4 855 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 VPS37AQ8NEZ2 397 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 OR13C4Q8NGS5 318 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 WDR36Q8NI36 951 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 NUDT8Q8WV74 236 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 FOPNLQ96NB1 174 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ABCG8Q9H221 673 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 IMPAD1Q9NX62 359 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 NDRG2Q9UN36 371 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 COPS3Q9UNS2 423 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 E9PQ18 207 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 H3BNC9 293 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 GFRA2O00451 464 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 CYP17A1P05093 508 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 CEBPBP17676 345 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 LHCGRP22888 699 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ADRA1AP35348 466 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 EPHA5P54756 1037 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 NRG1Q02297 640 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF33AQ06730 810 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 HSDL2Q6YN16 418 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 Q6ZPB1 254 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 CALHM3Q86XJ0 350 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SRFBP1Q8NEF9 429 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 KIAA1191Q96A73 305 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ASIC4Q96FT7 647 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 TRMT2BQ96GJ1 504 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PELOQ9BRX2 385 aaKnown RBP11.62□□□□□ -0.55
C9orf3-203ENST00000375315 TAPBPLQ9BX59 468 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SLC25A51Q9H1U9 297 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MIXL1Q9H2W2 232 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 TAS2R16Q9NYV7 291 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MAB21L2Q9Y586 359 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PCDHB9Q9Y5E1 797 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 hCG_1807616A0A1W2PRN6 198 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ANTXRLA6NF34 631 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PRSS44E7EML9 344 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PRAMEF11O60813 436 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SSTR4P31391 388 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ALDH9A1P49189 494 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 AP1S2P56377 157 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ABATP80404 500 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ARF5P84085 180 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 IL10RBQ08334 325 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 KIAA0040Q15053 153 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 AP5B1Q2VPB7 878 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 HSD17B12Q53GQ0 312 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SIRPB2Q5JXA9 342 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 IL27RAQ6UWB1 636 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MSLNLQ96KJ4 702 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 GSX2Q9BZM3 304 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 CIPCQ9C0C6 399 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 LDAHQ9H6V9 325 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 ANKRA2Q9H9E1 313 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 POPDC3Q9HBV1 291 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SIRT5Q9NXA8 310 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 RPS6KA6Q9UK32 745 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 DUSP12Q9UNI6 340 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 SSR3Q9UNL2 185 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 NCKAP1Q9Y2A7 1128 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 PCDHGB7Q9Y5F8 929 aa11.62□□□□□ -0.55
C9orf3-203ENST00000375315 MIA3Q5JRA6 1907 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 GMDSO60547 372 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LGI1O95970 557 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 HLA-DQB1P01920 261 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 IL6P05231 212 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MAOBP27338 520 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ELOAQ14241 798 aaKnown RBP11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LY6G5CQ5SRR4 150 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 KCT2Q8NC54 265 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ATP6V1C2Q8NEY4 427 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 OR8K3Q8NH51 312 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 CREB3L4Q8TEY5 395 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ZBED6CLQ96FA7 236 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-203ENST00000375315 DPY30Q9C005 99 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MFSD1Q9H3U5 465 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms