RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KMOO15229 486 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 KRT33AO76009 404 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 UBXN7O94888 489 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ADAP00813 363 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TNFRSF1BP20333 461 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GPALPP1Q8IXQ4 340 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 OR52N2Q8NGI0 321 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ZFP90Q8TF47 636 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ADAD1Q96M93 576 aaKnown RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GORASP2Q9H8Y8 452 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GPRC5BQ9NZH0 403 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 STUB1Q9UNE7 303 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PRELID1Q9Y255 219 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ACTL7AQ9Y615 435 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 EIF3FO00303 357 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 AXIN1O15169 862 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ENPP2Q13822 863 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 KEAP1Q14145 624 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TCEAL5Q5H9L2 206 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ENPP7Q6UWV6 458 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 PHC2Q8IXK0 858 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ARMC10Q8N2F6 343 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TRAM1L1Q8N609 369 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CHDHQ8NE62 594 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 OR2T33Q8NG76 320 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 IL26Q9NPH9 171 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM88BA6NKF7 163 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 M0QZQ0 153 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SLC19A2O60779 497 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 DEFA5Q01523 94 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 RUNDC3AQ59EK9 446 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 IRAK1BP1Q5VVH5 260 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ABHD13Q7L211 337 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF627Q7L945 461 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 AMIGO1Q86WK6 493 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 PAQR7Q86WK9 346 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 GID4Q8IVV7 300 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TIGD4Q8IY51 512 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 PRSS58Q8IYP2 241 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TTC9BQ8N6N2 239 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 RELTQ969Z4 430 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 IGSF21Q96ID5 467 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 UBXN10Q96LJ8 280 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SLC12A9Q9BXP2 914 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 NAA50Q9GZZ1 169 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 HEBP1Q9NRV9 189 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SACM1LQ9NTJ5 587 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SLAMF8Q9P0V8 285 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 MAP1BP46821 2468 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 EDDM13A0A1B0GTR0 161 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 C2orf78A6NCI8 922 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 LRRN3E7EW58 273 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 VILLO15195 856 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 MRPS14O60783 128 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CCND3P30281 292 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 LCN1P31025 176 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CBX5P45973 191 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 VEZF1Q14119 521 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 NFE2L1Q14494 772 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF648Q5T619 568 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 PRAMEF17Q5VTA0 474 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 KCTD11Q693B1 232 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TSPAN33Q86UF1 283 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ALDH16A1Q8IZ83 802 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 IRF7Q92985 503 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 S100A16Q96FQ6 103 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 WDR83Q9BRX9 315 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CST11Q9H112 138 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 LRRN3Q9H3W5 708 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 OLAHQ9NV23 265 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 RTCAO00442 366 aaKnown RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 OXSR1O95747 527 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CSN2P05814 226 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ANXA3P12429 323 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 IL12BP29460 328 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 GCGRP47871 477 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CD97P48960 835 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 HK3P52790 923 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SEC13P55735 322 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 C2orf27AQ580R0 203 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF805Q5CZA5 627 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 NUP54Q7Z3B4 507 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 NAGSQ8N159 534 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 SHKBP1Q8TBC3 707 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 B3GNT4Q9C0J1 378 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-203ENST00000375274 MLXQ9UH92 298 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 GNG8Q9UK08 70 aa11.06□□□□□ -0.64
PTCH1-203ENST00000375274 CHD4Q14839 1912 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 LOC285095A0A1B0GVY8 99 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 C5orf51A6NDU8 294 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR2AT4A6NND4 320 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms