RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 NIPAL1Q6NVV3 410 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 TM4SF19Q96DZ7 209 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 HS3ST6Q96QI5 342 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 MED18Q9BUE0 208 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 KLHL28Q9NXS3 571 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 PSD3Q9NYI0 1048 aa16■□□□□ 0.15
H2AFX-201ENST00000375167 MATN4O95460 622 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 RFPL3SP0C7P2 107 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 IDUAP35475 653 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 PIGAP37287 484 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 DIO3P55073 304 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 KCNJ2P63252 427 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 DEFB134Q4QY38 66 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 CASC4Q6P4E1 433 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 OPN5Q6U736 354 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 MFSD3Q96ES6 412 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 WFIKKN1Q96NZ8 548 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 KCNK17Q96T54 332 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 SLC30A3Q99726 388 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 TIMP4Q99727 224 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 PIGQQ9BRB3 760 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 PRDM14Q9GZV8 571 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 ZFP64Q9NPA5 681 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 PNO1Q9NRX1 252 aaKnown RBP15.99■□□□□ 0.15
H2AFX-201ENST00000375167 TMEM160Q9NX00 188 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 ANAPC5Q9UJX4 755 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 CAMK2AQ9UQM7 478 aa15.99■□□□□ 0.15
H2AFX-201ENST00000375167 DYSFO75923 2080 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 SVEP1Q4LDE5 3571 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 E7ENX8 843 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CD3EAPO15446 510 aaKnown RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 SLC16A8O95907 504 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CATP04040 527 aaKnown RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 TAP2Q03519 686 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 DUSP8Q13202 625 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 MORF4L2Q15014 288 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 UBAP2Q5T6F2 1119 aaKnown RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CAPN13Q6MZZ7 669 aaPredicted RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CES3Q6UWW8 571 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 ZNF572Q7Z3I7 529 aaPredicted RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 LRRC25Q8N386 305 aaPredicted RBP15.98■□□□□ 0.15
H2AFX-201ENST00000375167 MPP5Q8N3R9 675 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 AFAP1L2Q8N4X5 818 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CEP112Q8N8E3 955 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 ZFP3Q96NJ6 502 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 PKP4Q99569 1192 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 SHARPINQ9H0F6 387 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 PIGMQ9H3S5 423 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CALHM2Q9HA72 323 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 CATSPERZQ9NTU4 200 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 ZFATQ9P243 1243 aa15.98■□□□□ 0.15
H2AFX-201ENST00000375167 VAPBO95292 243 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 RNH1P13489 461 aaKnown RBP15.97■□□□□ 0.15
H2AFX-201ENST00000375167 ALOX12P18054 663 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 PAMP19021 973 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 ARNTP27540 789 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 CFPP27918 469 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 GPR143P51810 404 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 HK2P52789 917 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 RCAN2Q14206 197 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 SEMA3AQ14563 771 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 PDLIM3Q53GG5 364 aaPredicted RBP15.97■□□□□ 0.15
H2AFX-201ENST00000375167 LIPNQ5VXI9 398 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 C12orf54Q6X4T0 127 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 C9orf106Q8NAJ2 232 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 ZNF740Q8NDX6 193 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 ZNF480Q8WV37 535 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 SREK1Q8WXA9 508 aaKnown RBP15.97■□□□□ 0.15
H2AFX-201ENST00000375167 SNF8Q96H20 258 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 SIGLEC10Q96LC7 697 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 ADAM19Q9H013 955 aa15.97■□□□□ 0.15
H2AFX-201ENST00000375167 A0A0G2JK05 382 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 FAM187AA6NFU0 413 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 EFCAB8A8MWE9 144 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 SNPHO15079 494 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 SEC31AO94979 1220 aaKnown RBP15.96■□□□□ 0.15
H2AFX-201ENST00000375167 CHRM3P20309 590 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 ATP5DP30049 168 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 TTPAP49638 278 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 EIF3BP55884 814 aaKnown RBP15.96■□□□□ 0.15
H2AFX-201ENST00000375167 FOXF2Q12947 444 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 PHKG1Q16816 387 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 HSDL2Q6YN16 418 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 TRMT61AQ96FX7 289 aaKnown RBP15.96■□□□□ 0.15
H2AFX-201ENST00000375167 MARCH4Q9P2E8 410 aaPredicted RBP15.96■□□□□ 0.15
H2AFX-201ENST00000375167 MAD1L1Q9Y6D9 718 aa15.96■□□□□ 0.15
H2AFX-201ENST00000375167 CTAGE15A4D2H0 777 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 LRRC3CA6NJW4 275 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 NDUFS4O43181 175 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 PSIP1O75475 530 aaKnown RBP15.95■□□□□ 0.14
H2AFX-201ENST00000375167 PGRP06401 933 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 CTAGE8P0CG41 777 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 SRD5A1P18405 259 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 GDF1P27539 372 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 GRK3P35626 688 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 C2orf54Q08AI8 447 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 TBL3Q12788 808 aaKnown RBP15.95■□□□□ 0.14
H2AFX-201ENST00000375167 MRNIPQ6NTE8 343 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 SDCCAG8Q86SQ7 713 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms