RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 STARD6P59095 220 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FCRL6Q6DN72 434 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FAM180BQ6P0A1 224 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FBXO42Q6P3S6 717 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TRIM73Q86UV7 250 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RBM12BQ8IXT5 1001 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 AMDHD1Q96NU7 426 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 OR2A5Q96R48 311 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM121BQ9BXQ6 578 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SMURF2Q9HAU4 748 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CLK4Q9HAZ1 481 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SCN3AQ9NY46 2000 aa17.06■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MYOCOSA0A1B0GUC4 107 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 C2orf74A8MZ97 194 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MYO1GB0I1T2 1018 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 hCG_2039718K7EN88 272 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 AIFM1O95831 613 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TFAP2AP05549 437 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CELA2BP08218 269 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC35G6P0C7Q6 338 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 POLR2CP19387 275 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CERS1P27544 350 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 AQP1P29972 269 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NTSP30990 170 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CASP9P55211 416 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 HSPB3Q12988 150 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZC3H12BQ5HYM0 836 aaKnown RBP17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TTC23Q5W5X9 447 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FIGLAQ6QHK4 219 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM64Q6YI46 380 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM26Q6ZUK4 368 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 C6orf120Q7Z4R8 191 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 HS3ST5Q8IZT8 346 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FRMD1Q8N878 549 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC37A2Q8TED4 501 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PATE1Q8WXA2 126 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 LZICQ8WZA0 190 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 UCN3Q969E3 161 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TAMM41Q96BW9 452 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TPD52L3Q96J77 140 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC6A18Q96N87 628 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MBOAT4Q96T53 435 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 YTHDF1Q9BYJ9 559 aaKnown RBP17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TPSD1Q9BZJ3 242 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ROGDIQ9GZN7 287 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TOR3AQ9H497 397 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NDUFA13Q9P0J0 144 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PILRAQ9UKJ1 303 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ATG4BQ9Y4P1 393 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEM131Q92545 1883 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 EML5Q05BV3 1969 aa17.05■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SMIM31A0A1B0GVY4 71 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 GSAPA4D1B5 854 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 VILLO15195 856 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 B4GALT2O60909 372 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PGM3O95394 542 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SMIM10L1P0DMW3 83 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CTSEP14091 401 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ARHGDIAP52565 204 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TUBA4AP68366 448 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 UBXN2BQ14CS0 331 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CEBPEQ15744 281 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 REEP3Q6NUK4 255 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC48A1Q6P1K1 146 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TTC33Q6PID6 262 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ISLR2Q6UXK2 745 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CEACAM20Q6UY09 585 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TAF8Q7Z7C8 310 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 GJD3Q8N144 294 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FAM160A2Q8N612 972 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 HORMAD2Q8N7B1 307 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ARL10Q8N8L6 244 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TSPAN14Q8NG11 270 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 OR10G6Q8NH81 332 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SFXN5Q8TD22 340 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 UTP15Q8TED0 518 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SMIM10Q96HG1 83 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SHDQ96IW2 340 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 THUMPD1Q9NXG2 353 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TMEFF2Q9UIK5 374 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 C3orf18Q9UK00 162 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CES1P1Q9UKY3 287 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SNX11Q9Y5W9 270 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TRIM64CA6NLI5 447 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PROM1O43490 865 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CTSVO60911 334 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NELFEP18615 380 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CD27P26842 260 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CCT3P49368 545 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RAB8AP61006 207 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SPDYE7PQ495Y7 208 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 IFI44LQ53G44 452 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF542PQ5EBM4 170 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZC3H7AQ8IWR0 971 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RSC1A1Q92681 617 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MYCBPQ99417 103 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms