RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ETHE1O95571 254 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 CD99P14209 185 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 TNNI3P19429 210 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ENDOUP21128 410 aaKnown RBP12.74□□□□□ -0.37
CXCL12-202ENST00000374426 KCNC1P48547 511 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ID2Q02363 134 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 DOC2AQ14183 400 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 SLC10A1Q14973 349 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
CXCL12-202ENST00000374426 OPN5Q6U736 354 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF793Q6ZN11 406 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 SPATA6LQ8N4H0 392 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 OR5L2Q8NGL0 311 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF721Q8TF20 911 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ESAMQ96AP7 390 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 WDR34Q96EX3 536 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 VPS39Q96JC1 886 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 KCNC2Q96PR1 638 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 FOXC2Q99958 501 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 MAPKAP1Q9BPZ7 522 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 CNPPD1Q9BV87 410 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 DERL2Q9GZP9 239 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 POPDC3Q9HBV1 291 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 DNAJB12Q9NXW2 375 aaKnown RBP12.74□□□□□ -0.37
CXCL12-202ENST00000374426 WWOXQ9NZC7 414 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 ATG4BQ9Y4P1 393 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
CXCL12-202ENST00000374426 FAM221AA4D161 298 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 TP73O15350 636 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 WDR1O75083 606 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 PIAS1O75925 651 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 P04436 131 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 PIGAP37287 484 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 HSPA7P48741 367 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 MAN2A2P49641 1150 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ARL4CP56559 192 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 FOLH1Q04609 750 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 TGM3Q08188 693 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ASPHQ12797 758 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 MPEG1Q2M385 716 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 SLC25A35Q3KQZ1 300 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 PIGGQ5H8A4 983 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ZZZ3Q8IYH5 903 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 NINJ1Q92982 152 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-202ENST00000374426 SARAFQ96BY9 339 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 PTCD3Q96EY7 689 aaKnown RBP12.73□□□□□ -0.37
CXCL12-202ENST00000374426 EFCAB11Q9BUY7 163 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 LIME1Q9H400 295 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 LDAHQ9H6V9 325 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 SH2D2AQ9NP31 389 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 CCM2LQ9NUG4 571 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF358Q9NW07 568 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
CXCL12-202ENST00000374426 TRGV5A0A0B4J1U4 118 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 RTCAO00442 366 aaKnown RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 CLGNO14967 610 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 HCN1O60741 890 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 STK16O75716 305 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 IGKV3-11P04433 115 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 RFPL3SP0C7P2 107 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 EPORP19235 508 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ATP5A1P25705 553 aaKnown RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 SNTB1Q13884 538 aaKnown RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 PDK4Q16654 411 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF791Q3KP31 576 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 CDKL4Q5MAI5 379 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ARSKQ6UWY0 536 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 LYPD8Q6UX82 237 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 WDR53Q7Z5U6 358 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 GPSM1Q86YR5 675 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 C9orf40Q8IXQ3 194 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ACOT4Q8N9L9 421 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 SNX31Q8N9S9 440 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 FBXO36Q8NEA4 188 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 NUBPLQ8TB37 319 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 SENP5Q96HI0 755 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 RUNDC3BQ96NL0 473 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 TBCDQ9BTW9 1192 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 MS4A8Q9BY19 250 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ROGDIQ9GZN7 287 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 CNOT10Q9H9A5 744 aaKnown RBP12.72□□□□□ -0.37
CXCL12-202ENST00000374426 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 SMYD2Q9NRG4 433 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 COPS7AQ9UBW8 275 aa12.72□□□□□ -0.37
CXCL12-202ENST00000374426 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms