RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CFAP20Q9Y6A4 193 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 COCHO43405 550 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 AOC2O75106 756 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 HSD17B1P14061 328 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 OR1E2P47887 323 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 KCNC4Q03721 635 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 KBTBD6Q86V97 674 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF101Q8IZC7 436 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CMTM8Q8IZV2 173 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 BBS10Q8TAM1 723 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PIP5K1AQ99755 562 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 OR51I1Q9H343 314 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 TMEM185BQ9H7F4 350 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PCDHB16Q9NRJ7 776 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 MMP20O60882 483 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RFPL2O75678 378 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 GGT1P19440 569 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PDGFRLQ15198 375 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PCBP2Q15366 365 aaKnown RBP eCLIP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 HSDL2Q6YN16 418 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RAD9AQ99638 391 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 SYT11Q9BT88 431 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 BIN3Q9NQY0 253 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 FAIMQ9NVQ4 179 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 EBF1Q9UH73 591 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 MYH3P11055 1940 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 C2orf74A8MZ97 194 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 LEFTY2O00292 366 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CAPN5O15484 640 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 IFNA4P05014 189 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PIGFQ07326 219 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 HNRNPA0Q13151 305 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CARM1Q86X55 608 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 TCEANCQ8N8B7 351 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 TM9SF2Q99805 663 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PDLIM7Q9NR12 457 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 SMOXQ9NWM0 555 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 MARCH4Q9P2E8 410 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 FAAHO00519 579 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 H2AFB2P0C5Z0 115 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RPL35P42766 123 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 LUMP51884 338 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 GALNT1Q10472 559 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 ST3GAL4Q11206 333 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 SSX6Q7RTT6 188 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 COMTD1Q86VU5 262 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 YIPF7Q8N8F6 280 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 B4GALT6Q9UBX8 382 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 IGKV6-21A0A0C4DH24 114 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 FLRT2O43155 660 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 MT-ND5P03915 603 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 EDNRBP24530 442 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PREPP48147 710 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 BLKP51451 505 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 WNT7BP56706 349 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 TRAM2Q15035 370 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 SPIN3Q5JUX0 258 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 MYRFLQ96LU7 910 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GSKIPQ9P0R6 139 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PIGBOS1A0A0B4J2F0 54 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 TMEM150CB9EJG8 249 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 TYRP14679 529 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 CXCR1P25024 350 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GSTM2P28161 218 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 ACTR1BP42025 376 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 ACTR1AP61163 376 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 HERV-K104P61576 105 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GTF2IRD2BQ6EKJ0 949 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GTF2IRD2Q86UP8 949 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-202ENST00000373474 ENY2Q9NPA8 101 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 NUFIP1Q9UHK0 495 aaKnown RBP13.65□□□□□ -0.22
LMX1B-202ENST00000373474 BOLA2-SMG1P6H3BVE0 249 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 CSTBP04080 98 aaKnown RBP13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GNMTQ14749 295 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PMEPA1Q969W9 287 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PNO1Q9NRX1 252 aaKnown RBP13.65□□□□□ -0.22
LMX1B-202ENST00000373474 EXTL2Q9UBQ6 330 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 PTTG1O95997 202 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 CSF2P04141 144 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 BCKDHAP12694 445 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 GKP32189 559 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 MASP1P48740 699 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 OR4D2P58180 307 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 NKAPLQ5M9Q1 402 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms