RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 C1GALT1C1LP0DN25 315 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 HSD3B1P14060 373 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 FBLP22087 321 aaKnown RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 CBLP22681 906 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 DNAAF1Q8NEP3 725 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 OR9I1Q8NGQ6 314 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 ATG5Q9H1Y0 275 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 LDB2O43679 373 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 TUBG1P23258 451 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 GABRA3P34903 492 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 KCNC1P48547 511 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 ZNF805Q5CZA5 627 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 PHTF2Q8N3S3 785 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 RAB8BQ92930 207 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 FBXL18Q96ME1 805 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 NPY6RQ99463 290 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 AGAP5A6NIR3 686 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 C11orf98E9PRG8 122 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 FAM189A1O60320 539 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 FGF18O76093 207 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 UQCRC1P31930 480 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 CRISP1P54107 249 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 PLCXD2Q0VAA5 305 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 MALLQ13021 153 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 HAGHLQ6PII5 290 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 PHC2Q8IXK0 858 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 OR8K3Q8NH51 312 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SMOQ99835 787 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 DEFB126Q9BYW3 111 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 PDE7BQ9NP56 450 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 OARD1Q9Y530 152 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 NARSO43776 548 aaKnown RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 KCNJ13O60928 360 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 DNAJB5O75953 348 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SFTPBP07988 381 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 GGT5P36269 586 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SOX2P48431 317 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 ARSFP54793 590 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 PTCHD1Q96NR3 888 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SRRDQ9UH36 339 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 H7BY64 318 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 AK1P00568 194 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 BTBD16Q32M84 506 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 LY6G5CQ5SRR4 150 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 TXNRD3NBQ6F5E7 133 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 FTMTQ8N4E7 242 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 NUP43Q8NFH3 380 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 DAZLQ92904 295 aaKnown RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 PRAP1Q96NZ9 151 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 DOHHQ9BU89 302 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 MVB12BQ9H7P6 319 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 WRAP73Q9P2S5 460 aaPredicted RBP11.09□□□□□ -0.63
VCL-202ENST00000372755 KLHL21Q9UJP4 597 aa11.09□□□□□ -0.63
VCL-202ENST00000372755 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 GLOD5A6NK44 160 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 H7C2Y5 167 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 FCER2P06734 321 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 OR12D1P0DN82 309 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PGCP20142 388 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CD40LGP29965 261 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ADH7P40394 386 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ACTA2P62736 377 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ACTG2P63267 376 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CCINQ13939 588 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 TMEM69Q5SWH9 247 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PIAS4Q8N2W9 510 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 OR10Q1Q8NGQ4 319 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PGAM5Q96HS1 289 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 WDR92Q96MX6 357 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ACTR6Q9GZN1 396 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 RABL2AQ9UBK7 228 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 CLEC4EQ9ULY5 219 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 RABL2BQ9UNT1 228 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 C1orf226A1L170 272 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 KLHL33A6NCF5 533 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ASGR2P07307 311 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CCL5P13501 91 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 HLA-EP13747 358 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 RPS3P23396 243 aaKnown RBP eCLIP11.08□□□□□ -0.645e-7■■■■□ 19.7
VCL-202ENST00000372755 MLLT10P55197 1068 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ATXN7L3Q14CW9 347 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 UGT8Q16880 541 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 AADACL4Q5VUY2 407 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 RNF111Q6ZNA4 994 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ZNF440Q8IYI8 595 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PROKR1Q8TCW9 393 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms