RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 TMEM203Q969S6 136 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 RNF31Q96EP0 1072 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 MND1Q9BWT6 205 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 TSSK6Q9BXA6 273 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 RSPO3Q9BXY4 272 aaPredicted RBP15.62■□□□□ 0.09
SDC4-201ENST00000372733 MRPL9Q9BYD2 267 aaKnown RBP15.62■□□□□ 0.09
SDC4-201ENST00000372733 FAM83DQ9H4H8 585 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 LSM7Q9UK45 103 aaKnown RBP15.62■□□□□ 0.09
SDC4-201ENST00000372733 NINQ8N4C6 2090 aa15.62■□□□□ 0.09
SDC4-201ENST00000372733 IQCMA0A1B0GVH7 501 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 TMEM88BA6NKF7 163 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 ADAP00813 363 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SELPP16109 830 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 PRKCAP17252 672 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 POLR2EP19388 210 aaKnown RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 PDHA2P29803 388 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SSTR4P31391 388 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 DSTNP60981 165 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 TBPL1P62380 186 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SCN1BQ07699 218 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 PCDH1Q08174 1060 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 PHC2Q8IXK0 858 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 TCEANCQ8N8B7 351 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 FIBINQ8TAL6 211 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 GDF15Q99988 308 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SORBS1Q9BX66 1292 aaKnown RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 SLC22A4Q9H015 551 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SPNS1Q9H2V7 528 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 DMRT3Q9NQL9 472 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SSR3Q9UNL2 185 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 KCNE2Q9Y6J6 123 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 A0A1W2PRB8 838 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SLC35F4A4IF30 521 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 OR10H3O60404 316 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 CSF3P09919 207 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 HLA-FP30511 346 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 CD83Q01151 205 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 CAMK2BQ13554 666 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 GLYR1Q49A26 553 aaPredicted RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 ZDHHC20Q5W0Z9 365 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 TNFAIP8L2Q6P589 184 aaPredicted RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 GDPGP1Q6ZNW5 385 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 SIMC1Q8NDZ2 872 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 GPR32P1Q8NGA4 272 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 APOBEC4Q8WW27 367 aaKnown RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 RIOK2Q9BVS4 552 aaKnown RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 SNX7Q9UNH6 387 aa15.61■□□□□ 0.09
SDC4-201ENST00000372733 YARS2Q9Y2Z4 477 aaKnown RBP15.61■□□□□ 0.09
SDC4-201ENST00000372733 CCDC182A6NF36 153 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 MYL12BO14950 172 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 LRRTM2O43300 516 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 BCHEP06276 602 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 KLK1P06870 262 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 IL3P08700 152 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 ELAVL4P26378 380 aaKnown RBP15.6■□□□□ 0.09
SDC4-201ENST00000372733 RPS5P46782 204 aaKnown RBP15.6■□□□□ 0.09
SDC4-201ENST00000372733 XKP51811 444 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 ASAH1Q13510 395 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 TMEM201Q5SNT2 666 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 MEDAGQ5VYS4 303 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 C22orf42Q6IC83 251 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 FAM71E1Q6IPT2 247 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 TMIGD1Q6UXZ0 262 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 ZNF438Q7Z4V0 828 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 METTL3Q86U44 580 aaKnown RBP15.6■□□□□ 0.09
SDC4-201ENST00000372733 RBM45Q8IUH3 476 aaKnown RBP15.6■□□□□ 0.09
SDC4-201ENST00000372733 TRIM48Q8IWZ4 208 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 NANOGP1Q8N7R0 232 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 RASGEF1AQ8N9B8 481 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 UBASH3BQ8TF42 649 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 PRRG3Q9BZD7 231 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 CXorf36Q9H7Y0 433 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 IL21Q9HBE4 155 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 TMCC3Q9ULS5 477 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 B4DXG7 233 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 OLFM2O95897 454 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 ITGB7P26010 798 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 GPAT3Q53EU6 434 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 MPPE1Q53F39 396 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 C12orf73Q69YU5 71 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 CASP12Q6UXS9 341 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 CEACAM20Q6UY09 585 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 DEF8Q6ZN54 512 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 NOXA1Q86UR1 476 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 ZNF480Q8WV37 535 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 SLC25A46Q96AG3 418 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 TXNL4BQ9NX01 149 aaKnown RBP15.6■□□□□ 0.09
SDC4-201ENST00000372733 GULP1Q9UBP9 304 aa15.6■□□□□ 0.09
SDC4-201ENST00000372733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 A0A1W2PQL4 384 aaPredicted RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 PIPSLA2A3N6 862 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 NOTOA8MTQ0 251 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 HEPACAM2A8MVW5 462 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 AP2A2O94973 939 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 EFEMP2O95967 443 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 MSL3P1P0C860 447 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 TRAPPC2P0DI81 140 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 TRAPPC2BP0DI82 140 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 MYL9P24844 172 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 ATN1P54259 1190 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms