RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 NRROSQ86YC3 692 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR21Q99679 349 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 PTPN18Q99952 460 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 SMOC2Q9H3U7 446 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 C4AP0C0L4 1744 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 HEPACAM2A8MVW5 462 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 HHLA1C9JL84 531 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACP5P13686 325 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ANKRD22Q5VYY1 191 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC22A25Q6T423 547 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 DCUN1D3Q8IWE4 304 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 UBR7Q8N806 425 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 KDM1BQ8NB78 822 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 IMPA2O14732 288 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 MT-CYBP00156 380 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 MASP1P48740 699 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 HIST2H3PS2Q5TEC6 136 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 NTAN1Q96AB6 310 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TM9SF2Q99805 663 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 RAB11FIP5Q9BXF6 653 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 POT1Q9NUX5 634 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TXNL4BQ9NX01 149 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 CDH10Q9Y6N8 788 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 BIDP55957 195 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TLE1Q04724 770 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 RNF212BA8MTL3 300 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 E7EQ34 232 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TLR4O00206 839 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HCRTO43612 131 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 AGXTP21549 392 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 VIPR1P32241 457 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 EEF1A2Q05639 463 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 LSAMPQ13449 338 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 POU4F3Q15319 338 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 LRRC66Q68CR7 880 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TMPRSS7Q7RTY8 843 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 MCEMP1Q8IX19 187 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 Q8N402 240 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 BANPQ8N9N5 519 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZCCHC10Q8TBK6 192 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 KRBOX1C9JBD0 128 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 PIRO00625 290 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR1F1O43749 312 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 KERAO60938 352 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HLA-EP13747 358 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HNF1AP20823 631 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 GNRHRP30968 328 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NIPAL4Q0D2K0 466 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HNRNPA0Q13151 305 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 MYLK3Q32MK0 819 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TMEM236Q5W0B7 351 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 ARL9Q6T311 187 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF572Q7Z3I7 529 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 CPNE9Q8IYJ1 553 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 PCBD2Q9H0N5 130 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 HS3ST4Q9Y661 456 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 RBBP9O75884 186 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 RENP00797 406 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NSG1P42857 185 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 TAS2R43P59537 309 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NFATC2Q13469 925 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 LDB1Q86U70 411 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF781Q8N8C0 355 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 PHOSPHO2Q8TCD6 241 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NSMAFQ92636 917 aa13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NOCTQ9UK39 431 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-202ENST00000372190 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A1B0GV50 99 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 TO15178 435 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 XKP51811 444 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 RAB41Q5JT25 222 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 SAMD14Q8IZD0 417 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 IQCF1Q8N6M8 205 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR10R2Q8NGX6 335 aa13.52□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR8S1Q8NH09 359 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms