RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ATP6AP2A0A1C7CYW4 349 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SAC3D1A6NKF1 404 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 H3BSA7 217 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 GSTA4O15217 222 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 MRPS14O60783 128 aaKnown RBP9.88□□□□□ -0.83
COL5A1-202ENST00000371820 ATP6AP2O75787 350 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SLCO2B1O94956 709 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CHRM5P08912 532 aaPredicted RBP9.88□□□□□ -0.83
COL5A1-202ENST00000371820 PRKAR1AP10644 381 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 ST6GAL1P15907 406 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CAPN3P20807 821 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CYP2A7P20853 494 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 JAK1P23458 1154 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 MAPK1P28482 360 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CCR7P32248 378 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 HLCSP50747 726 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 RAB28P51157 221 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 TMBIM6P55061 237 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 ITGA1P56199 1179 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 RPS15P62841 145 aaKnown RBP9.88□□□□□ -0.83
COL5A1-202ENST00000371820 IL18R1Q13478 541 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 GRB7Q14451 532 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SEMA3AQ14563 771 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 KIR2DS3Q14952 304 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 GPR19Q15760 415 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SLC5A12Q1EHB4 618 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 TTLL9Q3SXZ7 439 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 C6orf136Q5SQH8 315 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 PLEKHS1Q5SXH7 462 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SULT1C3Q6IMI6 304 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 NANOGP8Q6NSW7 305 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 PWWP2BQ6NUJ5 590 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SPESP1Q6UW49 350 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 MSANTD1Q6ZTZ1 278 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 LDB1Q86U70 411 aaPredicted RBP9.88□□□□□ -0.83
COL5A1-202ENST00000371820 RETREG3Q86VR2 466 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 GPR135Q8IZ08 494 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 ADGRF3Q8IZF5 1079 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CBR4Q8N4T8 237 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 METTL25Q8N6Q8 603 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 FAM47BQ8NA70 645 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 FAM156AQ8NDB6 213 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 RAD51AP1Q96B01 352 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 TCTN2Q96GX1 697 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CCDC115Q96NT0 180 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 GPR21Q99679 349 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 C17orf62Q9BQA9 187 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 CHRNA10Q9GZZ6 450 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 P2RY12Q9H244 342 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 MAGIXQ9H6Y5 334 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 NANOGQ9H9S0 305 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 SLC52A3Q9NQ40 469 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 INTS7Q9NVH2 962 aaKnown RBP9.88□□□□□ -0.83
COL5A1-202ENST00000371820 POLHQ9Y253 713 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 ANGPTL3Q9Y5C1 460 aa9.88□□□□□ -0.83
COL5A1-202ENST00000371820 A0A0J9YY10 115 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ISM1B1AKI9 464 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TMEM150CB9EJG8 249 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 E7EQ34 232 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 NKX2-8O15522 239 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ERN1O75460 977 aaKnown RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 CREG1O75629 220 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 OR6B1O95007 311 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TIAF1O95411 115 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 NTRK1P04629 796 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 PRPS2P11908 318 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 UGT2B7P16662 529 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 AGXTP21549 392 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 AOAHP28039 575 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ALDH3A2P51648 485 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ARHGDIAP52565 204 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 HPCAP84074 193 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TIAL1Q01085 375 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ABRQ12979 859 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TSNQ15631 228 aaKnown RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 CYHR1Q6ZMK1 362 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 MILR1Q7Z6M3 343 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 SYVN1Q86TM6 617 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ZDHHC13Q8IUH4 622 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF786Q8N393 782 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 C19orf47Q8N9M1 422 aaKnown RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 FNDC5Q8NAU1 212 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 B4GALNT2Q8NHY0 566 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 CT55Q8WUE5 264 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 APOBEC4Q8WW27 367 aaKnown RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 EXT2Q93063 718 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 MR1Q95460 341 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TBC1D20Q96BZ9 403 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 CLIP3Q96DZ5 547 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 THAP11Q96EK4 314 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 DOK1Q99704 481 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 DPH2Q9BQC3 489 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 C1orf50Q9BV19 199 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 SLC29A3Q9BZD2 475 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 TUBB1Q9H4B7 451 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 XKR8Q9H6D3 395 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 RMND5AQ9H871 391 aa9.87□□□□□ -0.83
COL5A1-202ENST00000371820 SEMA4BQ9NPR2 832 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-202ENST00000371820 DNAJB9Q9UBS3 223 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms