RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 KBTBD2Q8IY47 623 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 C8orf44Q96CB5 159 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 PPP3R2Q96LZ3 170 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 PELOQ9BRX2 385 aaKnown RBP12.93□□□□□ -0.34
SSR4-202ENST00000370085 LRTM1Q9HBL6 345 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 TNFRSF12AQ9NP84 129 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 SIRT5Q9NXA8 310 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 ZDHHC2Q9UIJ5 367 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 WBP11Q9Y2W2 641 aaKnown RBP12.93□□□□□ -0.34
SSR4-202ENST00000370085 ATG4BQ9Y4P1 393 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 ASB4Q9Y574 426 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 CACNA1GO43497 2377 aa12.93□□□□□ -0.34
SSR4-202ENST00000370085 NBEAQ8NFP9 2946 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 LOC400499M0QZD8 3231 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 TCRBV16S1A1N1A0A5B0 115 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 C1orf226A1L170 272 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 TMEM233B4DJY2 109 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 NPIPB8E9PQR5 432 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 DYNC1I1O14576 645 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ITM2AO43736 263 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 LYPLA1O75608 230 aaPredicted RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 IFNA16P05015 189 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ANXA4P09525 319 aaPredicted RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 COX6A1P12074 109 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 DRD2P14416 443 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 CHN1P15882 459 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 DDX5P17844 614 aaKnown RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 ITGA3P26006 1051 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 PIK3R1P27986 724 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 CCL11P51671 97 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 HK2P52789 917 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 BTG2P78543 158 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ZNF763Q0D2J5 394 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 MAD2L1Q13257 205 aaPredicted RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 TERF2Q15554 542 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 NDUFAF5Q5TEU4 345 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 PARP9Q8IXQ6 854 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 SAMD14Q8IZD0 417 aaPredicted RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 TMEM132CQ8N3T6 1108 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 GALNT16Q8N428 558 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ZNF781Q8N8C0 355 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 LSM14AQ8ND56 463 aaKnown RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 DAZLQ92904 295 aaKnown RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 TSLPQ969D9 159 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 C19orf60Q96EN9 201 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 APIPQ96GX9 242 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 RBM18Q96H35 190 aaKnown RBP12.92□□□□□ -0.34
SSR4-202ENST00000370085 CSF3RQ99062 836 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ZNF160Q9HCG1 818 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 ADAP2Q9NPF8 381 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 GPR83Q9NYM4 423 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 HAO1Q9UJM8 370 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 CLCA3PQ9Y6N3 262 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 PIEZO2Q9H5I5 2752 aa12.92□□□□□ -0.34
SSR4-202ENST00000370085 IGKV3D-11A0A0A0MRZ8 115 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 A0A1W2PR48 441 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 OR2W5A6NFC9 320 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 OR10H2O60403 315 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 VPS4BO75351 444 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 SKAP2O75563 359 aaPredicted RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 AIFM1O95831 613 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 SERPINA7P05543 415 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 TNNI3P19429 210 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PLIN5Q00G26 463 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 KCNAB2Q13303 367 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PCOLCEQ15113 449 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 ELAVL1Q15717 326 aaKnown RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 BTBD16Q32M84 506 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 UGT3A2Q3SY77 523 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 GALNTL6Q49A17 601 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PLAG1Q6DJT9 500 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 JMJD6Q6NYC1 403 aaPredicted RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 PAPD4Q6PIY7 484 aaKnown RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 TTC9Q92623 222 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 ZNF75CPQ92670 426 aaPredicted RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 TUBGCP3Q96CW5 907 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 DGAT2Q96PD7 388 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 SLC25A23Q9BV35 468 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 ALOXE3Q9BYJ1 711 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 LHPPQ9H008 270 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 NECTIN3Q9NQS3 549 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PNO1Q9NRX1 252 aaKnown RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 GIMAP4Q9NUV9 329 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 VTI1BQ9UEU0 232 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 TEKT2Q9UIF3 430 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PCDHGB7Q9Y5F8 929 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 PCDHGA9Q9Y5G4 932 aaKnown RBP12.91□□□□□ -0.34
SSR4-202ENST00000370085 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
SSR4-202ENST00000370085 MED13Q9UHV7 2174 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 A6NL46 340 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TRPC5OSA6NMA1 111 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms