RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SPRTNQ9H040 489 aaPredicted RBP22.57■■□□□ 1.2
SNX3-203ENST00000368979 MUC13Q9H3R2 512 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 USP22Q9UPT9 525 aa22.57■■□□□ 1.2
SNX3-203ENST00000368979 HYKKA2RU49 373 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 FLRT2O43155 660 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 FOXS1O43638 330 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 C1QCP02747 245 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 ZNF806P0C7X5 589 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 GZMMP51124 257 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 FAM53BQ14153 422 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 GPR19Q15760 415 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 CLPPQ16740 277 aaPredicted RBP22.56■■□□□ 1.2
SNX3-203ENST00000368979 TMTC4Q5T4D3 741 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 NIPAL1Q6NVV3 410 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 CALHM3Q86XJ0 350 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 BHLHE22Q8NFJ8 381 aaPredicted RBP22.56■■□□□ 1.2
SNX3-203ENST00000368979 OR5T3Q8NGG3 340 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 OR9A4Q8NGU2 314 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 OR10A6Q8NH74 314 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 ZBED6CLQ96FA7 236 aaPredicted RBP22.56■■□□□ 1.2
SNX3-203ENST00000368979 TPT1P8Q9HAU6 139 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 NEUROD4Q9HD90 331 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 BCAP29Q9UHQ4 241 aa22.56■■□□□ 1.2
SNX3-203ENST00000368979 SGK494L7N484 410 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 PSMG1O95456 288 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 FOLR1P15328 257 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 GPX2P18283 190 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 PPIBP23284 216 aaKnown RBP22.55■■□□□ 1.2
SNX3-203ENST00000368979 ERFP50548 548 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 OR4D2P58180 307 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 COL9A2Q14055 689 aaPredicted RBP22.55■■□□□ 1.2
SNX3-203ENST00000368979 GRM7Q14831 915 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 CEBPEQ15744 281 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 ARHGAP22Q7Z5H3 698 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 C10orf111Q8N326 155 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 TRIML2Q8N7C3 387 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 CNRIP1Q96F85 164 aaPredicted RBP22.55■■□□□ 1.2
SNX3-203ENST00000368979 CNDP2Q96KP4 475 aaKnown RBP22.55■■□□□ 1.2
SNX3-203ENST00000368979 IRAK4Q9NWZ3 460 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 PCDHB3Q9Y5E6 796 aa22.55■■□□□ 1.2
SNX3-203ENST00000368979 RP1P56715 2156 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 GOLGA4Q13439 2230 aaKnown RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 EVPLLA8MZ36 301 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 MYO1GB0I1T2 1018 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 FAM220BPB1ANY3 271 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 TMEM150CB9EJG8 249 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 RDH16O75452 317 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 KRT36O76013 467 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 NSA2O95478 260 aaKnown RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 NTSP30990 170 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 TLX1P31314 330 aaPredicted RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 MANFP55145 182 aaKnown RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 SKP1P63208 163 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 ABHD18Q0P651 414 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 OR52E8Q6IFG1 317 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 ZNF551Q7Z340 670 aaPredicted RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 TTC29Q8NA56 475 aaPredicted RBP22.54■■□□□ 1.2
SNX3-203ENST00000368979 HIPK4Q8NE63 616 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 OR2T12Q8NG77 320 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 PSMA8Q8TAA3 256 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 STMN2Q93045 179 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 AMDHD1Q96NU7 426 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 GLIPR2Q9H4G4 154 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 PIF1Q9H611 641 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 CXorf36Q9H7Y0 433 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 ACTR3BQ9P1U1 418 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 EGFL7Q9UHF1 273 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 SPACA6W5XKT8 324 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 SCN3AQ9NY46 2000 aa22.54■■□□□ 1.2
SNX3-203ENST00000368979 A0A0A6YYC8 382 aaPredicted RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 IGHV5-10-1A0A0J9YXX1 117 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 I3L1I5 382 aaPredicted RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 CYR61O00622 381 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 ERAL1O75616 437 aaKnown RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 OR2B3O76000 313 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 LDOC1O95751 146 aaPredicted RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 LMNAP02545 664 aaKnown RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 GCGRP47871 477 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 RAB38P57729 211 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 SF3A2Q15428 464 aaKnown RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 LCN8Q6JVE9 175 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 PRR23CQ6ZRP0 262 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 DHFR2Q86XF0 187 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 CLEC4FQ8N1N0 589 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 DTWD1Q8N5C7 304 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 OR1L3Q8NH93 324 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 SUN3Q8TAQ9 357 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 FAM120BQ96EK7 910 aaKnown RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 ZNF681Q96N22 645 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 SLC35A5Q9BS91 424 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 RASSF4Q9H2L5 321 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 RPF2Q9H7B2 306 aaKnown RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 RNPEPL1Q9HAU8 725 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 SIRT3Q9NTG7 399 aaPredicted RBP22.53■■□□□ 1.2
SNX3-203ENST00000368979 CORO2BQ9UQ03 480 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 ENTPD4Q9Y227 616 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 SNX13Q9Y5W8 968 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 ASXL3Q9C0F0 2248 aa22.53■■□□□ 1.2
SNX3-203ENST00000368979 NTN3O00634 580 aaPredicted RBP22.52■■□□□ 1.2
SNX3-203ENST00000368979 CDX4O14627 284 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms