RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 OCLNQ16625 522 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 C12orf73Q69YU5 71 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 FAM20CQ8IXL6 584 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 LSMEM1Q8N8F7 131 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 OR52N2Q8NGI0 321 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 WDR20Q8TBZ3 569 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 DNAJA4Q8WW22 397 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 MARVELD1Q9BSK0 173 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 NMNAT1Q9HAN9 279 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-203ENST00000368690 AUP1Q9Y679 476 aa16.64■□□□□ 0.25
CHTOP-203ENST00000368690 LINC00862A6NCI5 91 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 OR5K3A6NET4 321 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 SYN3O14994 580 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 KIAA0355O15063 1070 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 GASTP01350 101 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 OPN1SWP03999 348 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 MPC1LP0DKB6 136 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 OSMP13725 252 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 IRS1P35568 1242 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 AP1S1P61966 158 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 RRAS2P62070 204 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-203ENST00000368690 CHIT1Q13231 466 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 ZNF630Q2M218 657 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-203ENST00000368690 PAMR1Q6UXH9 720 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 SLC51BQ86UW2 128 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 SLC30A8Q8IWU4 369 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 TTC9BQ8N6N2 239 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 TP53I13Q8NBR0 393 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-203ENST00000368690 C19orf18Q8NEA5 215 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 ASB11Q8WXH4 323 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 BRF2Q9HAW0 419 aa16.63■□□□□ 0.25
CHTOP-203ENST00000368690 MYL12BO14950 172 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 GSTM1P09488 218 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ALPIP09923 528 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 POU2F1P14859 743 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 MYL12AP19105 171 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 IDSP22304 550 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SDC2P34741 201 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 CRATP43155 626 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 AP1S2P56377 157 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 RIPPLY1Q0D2K3 151 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 HSPA14Q0VDF9 509 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 RNF219Q5W0B1 726 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 OXR1Q8N573 874 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ATAD1Q8NBU5 361 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 PLA2G15Q8NCC3 412 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 OR4A15Q8NGL6 344 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 KCTD7Q96MP8 289 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TMEM175Q9BSA9 504 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 BHLHE41Q9C0J9 482 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 PPP1R3EQ9H7J1 279 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TRIM45Q9H8W5 580 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 GPATCH2Q9NW75 528 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 EIF3KQ9UBQ5 218 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TEKT2Q9UIF3 430 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TMCC3Q9ULS5 477 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 NDRG2Q9UN36 371 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SNX11Q9Y5W9 270 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SMAD6O43541 496 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ORC5O43913 435 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SRPRAP08240 638 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 BPIP17213 487 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SPAM1P38567 509 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TGM4P49221 684 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ZXDBP98169 803 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 CHRNA6Q15825 494 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 TRIQKQ629K1 86 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ZNF730Q6ZMV8 503 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ADGRG2Q8IZP9 1017 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 NATD1Q8N6N6 113 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 OR8J1Q8NGP2 316 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 NELL2Q99435 816 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 ISYNA1Q9NPH2 558 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 REV1Q9UBZ9 1251 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 STOML2Q9UJZ1 356 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 DIMT1Q9UNQ2 313 aaKnown RBP16.62■□□□□ 0.25
CHTOP-203ENST00000368690 SLC22A14Q9Y267 594 aa16.62■□□□□ 0.25
CHTOP-203ENST00000368690 PRR23AA6NEV1 266 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 J3KTA2 159 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 PLD2O14939 933 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 AP2A2O94973 939 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 FHP07954 510 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 SLC2A2P11168 524 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-203ENST00000368690 SRCP12931 536 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 PCBP3P57721 371 aaKnown RBP16.61■□□□□ 0.25
CHTOP-203ENST00000368690 ZNF91Q05481 1191 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 KCNC3Q14003 757 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 CDKN3Q16667 212 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 CXorf57Q6NSI4 855 aaKnown RBP16.61■□□□□ 0.25
CHTOP-203ENST00000368690 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-203ENST00000368690 PRRG3Q9BZD7 231 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 ATP6V1HQ9UI12 483 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 MGAT4BQ9UQ53 548 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 OR6C75A6NL08 312 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 GFYI3L273 518 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 AKR7A2O43488 359 aa16.61■□□□□ 0.25
CHTOP-203ENST00000368690 ETFAP13804 333 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms