RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 IGHV3-20A0A0C4DH32 117 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 SRRM3A6NNA2 597 aaPredicted RBP13.06□□□□□ -0.32
TPM3-211ENST00000368531 A8MUA0 341 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 MASP2O00187 686 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 ZNF195O14628 629 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 AKAP10O43572 662 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 LRATO95237 230 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 LBPP18428 481 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 SDC1P18827 310 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 TACR1P25103 407 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 ZNF763Q0D2J5 394 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 PPP1R32Q7Z5V6 425 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 RAB43Q86YS6 212 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 ZNF595Q8IYB9 648 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 LRRC34Q8IZ02 419 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 LIX1Q8N485 282 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 NPHS2Q9NP85 383 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 HEY2Q9UBP5 337 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
TPM3-211ENST00000368531 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 HS3ST3B1Q9Y662 390 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 PCSK5Q92824 1860 aa13.06□□□□□ -0.32
TPM3-211ENST00000368531 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 PEX12O00623 359 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 FGF17O60258 216 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 CTNSO60931 367 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 VPS4BO75351 444 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 IGHEP01854 428 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 IFNA16P05015 189 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 BCKDHAP12694 445 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 MMP11P24347 488 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 MAPK1P28482 360 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 IDH3AP50213 366 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 AQP5P55064 265 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 HSD17B7P56937 341 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 OR4D2P58180 307 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 CXADRP78310 365 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 FOLH1Q04609 750 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 EMX2Q04743 252 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 ACTN3Q08043 901 aaPredicted RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 VAC14Q08AM6 782 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 CDC20Q12834 499 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 STX4Q12846 297 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 ST3GAL2Q16842 350 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 UGT8Q16880 541 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 FAM180BQ6P0A1 224 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 C19orf48Q6RUI8 117 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 QSOX2Q6ZRP7 698 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 LARP4Q71RC2 724 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM3-211ENST00000368531 ANKRD37Q7Z713 158 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 TMEM132CQ8N3T6 1108 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 PLPP5Q8NEB5 264 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 RFWD2Q8NHY2 731 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 TANKQ92844 425 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 CRELD1Q96HD1 420 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 METTL2AQ96IZ6 378 aaKnown RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 MARK4Q96L34 752 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 FCRL1Q96LA6 429 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 OR52B2Q96RD2 323 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 EBF4Q9BQW3 602 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 FAM117AQ9C073 453 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 CCDC134Q9H6E4 229 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 PNO1Q9NRX1 252 aaKnown RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 EIF3LQ9Y262 564 aaKnown RBP13.05□□□□□ -0.32
TPM3-211ENST00000368531 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 MMACHCQ9Y4U1 282 aa13.05□□□□□ -0.32
TPM3-211ENST00000368531 C1orf226A1L170 272 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 SOCS6O14544 535 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ERAL1O75616 437 aaKnown RBP13.04□□□□□ -0.32
TPM3-211ENST00000368531 PRR35P0CG20 571 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 G6PDP11413 515 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ACPPP15309 386 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 PIK3R1P27986 724 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 PPP2R1BP30154 601 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ERVK-8P63133 956 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 GNGT1P63211 74 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 DEFB109BQ30KR1 87 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ZNF750Q32MQ0 723 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 KIRREL2Q6UWL6 708 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 CPEB2Q7Z5Q1 589 aaKnown RBP13.04□□□□□ -0.32
TPM3-211ENST00000368531 MRGPREQ86SM8 312 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 SCUBE1Q8IWY4 988 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 AMER2Q8N7J2 671 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 DNAJB14Q8TBM8 379 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 ADAMTS17Q8TE56 1095 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms