RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 AMIGO3Q86WK7 504 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 OR2L2Q8NH16 312 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 OR2AG1Q9H205 316 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 BRF2Q9HAW0 419 aa8.32□□□□□ -1.08
SYNE1-206ENST00000367253 SEMA4BQ9NPR2 832 aaPredicted RBP8.32□□□□□ -1.08
SYNE1-206ENST00000367253 GLI3P10071 1580 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 TOR1BO14657 336 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 IL1AP01583 271 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CBR1P16152 277 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CCR8P51685 355 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CLCNKBP51801 687 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 LUMP51884 338 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF33BQ06732 778 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 LRRN1Q6UXK5 716 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FAM151BQ6UXP7 276 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ARMC10Q8N2F6 343 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF606Q8WXB4 792 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MGME1Q9BQP7 344 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PPP1R3CQ9UQK1 317 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PDE10AQ9Y233 779 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 SH3PXD2BA1X283 911 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 TPP1O14773 563 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FSCN2O14926 492 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GPRIN2O60269 458 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MPZL2O60487 215 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PAGE1O75459 146 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF8P17098 575 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 TYRP1P17643 537 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NR4A2P43354 598 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GNG10P50151 68 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NKX6-1P78426 367 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GSTM4Q03013 218 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 KCNC3Q14003 757 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GPR33Q49SQ1 333 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 DCST2Q5T1A1 773 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ADNP2Q6IQ32 1131 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF529Q6P280 563 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 XKR5Q6UX68 686 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 C3P1Q6ZMU1 363 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FUNDC1Q8IVP5 155 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 SPEM1Q8N4L4 309 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 OR2L3Q8NG85 312 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 OR9K2Q8NGE7 335 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 HUS1BQ8NHY5 278 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 RHBDF1Q96CC6 855 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FXYD6-FXYD2A0A087WZ82 144 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 POM121BA6NF01 834 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 A8MUA0 341 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 TOR1AO14656 332 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 KCNK5O95279 499 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF888P0CJ79 500 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 HGFP14210 728 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MC4RP32245 332 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ALDH3B1P43353 468 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NUMBP49757 651 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 C2orf80Q0P641 193 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 LIPNQ5VXI9 398 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MED27Q6P2C8 311 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ASB18Q6ZVZ8 466 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 LRRC70Q7Z2Q7 622 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 VTCN1Q7Z7D3 282 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GPR180Q86V85 440 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 METTL25Q8N6Q8 603 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 OR2T12Q8NG77 320 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 THAP6Q8TBB0 222 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MOGAT1Q96PD6 335 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 RBP7Q96R05 134 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FXYD6Q9H0Q3 95 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MVB12BQ9H7P6 319 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FBXO6Q9NRD1 293 aaPredicted RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 C14orf105Q9NVL8 296 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MS4A12Q9NXJ0 267 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 RALYQ9UKM9 306 aaKnown RBP8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CAMK2AQ9UQM7 478 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 M0R129 80 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 M0R233 179 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 GRID2O43424 1007 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 F11P03951 625 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 RAB5CP51148 216 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CCL11P51671 97 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NDST2P52849 883 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 MXD1Q05195 221 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 PMPCAQ10713 525 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 NTRK3Q16288 839 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 SLC8B1Q6J4K2 584 aa8.31□□□□□ -1.08
SYNE1-206ENST00000367253 CXorf57Q6NSI4 855 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms