RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 NEIL2Q969S2 332 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TM9SF2Q99805 663 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 C2orf49Q9BVC5 232 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 B4GALT6Q9UBX8 382 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SNX7Q9UNH6 387 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ENPP4Q9Y6X5 453 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ZNF670-ZNF695F2Z2N8 137 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 PLA2G10O15496 165 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 MSL3P1P0C860 447 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 C2orf80Q0P641 193 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 LMAN2Q12907 356 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 EFR3AQ14156 821 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ANXA8L1Q5VT79 327 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 DTX3Q8N9I9 347 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SETD6Q8TBK2 473 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 MAPKAP1Q9BPZ7 522 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 C5AR2Q9P296 337 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 STOX2Q9P2F5 926 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 FRMPD3Q5JV73 1810 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TLX2O43763 284 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 PSKH1P11801 424 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRKN-205ENST00000366897 MAN2A2P49641 1150 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TAS2R50P59544 299 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.95□□□□□ -0.34
PRKN-205ENST00000366897 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 LIPJQ5W064 366 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TPRG1Q6ZUI0 275 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 COMMD6Q7Z4G1 85 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 SIMC1Q8NDZ2 872 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 OR52N2Q8NGI0 321 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ENKURQ8TC29 256 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 OTUB1Q96FW1 271 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TXNL4BQ9NX01 149 aaKnown RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 NDRG2Q9UN36 371 aaKnown RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SPIN1Q9Y657 262 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 IGSF6O95976 241 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 IFNW1P05000 195 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 BCHEP06276 602 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 PPIBP23284 216 aaKnown RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 PDHA2P29803 388 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 LIMS1P48059 325 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CHRNEQ04844 493 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 GLYR1Q49A26 553 aaPredicted RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 TTC23LQ6PF05 361 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CCDC149Q6ZUS6 474 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 Q6ZVL8 140 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRKN-205ENST00000366897 ZNF740Q8NDX6 193 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CLP1Q92989 425 aaKnown RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 VOPP1Q96AW1 172 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 PPCDCQ96CD2 204 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 RNF121Q9H920 327 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 SLC25A19Q9HC21 320 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 THSD1Q9NS62 852 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 TMEM161AQ9NX61 479 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 PLEKHB1Q9UF11 243 aaPredicted RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 CORO2BQ9UQ03 480 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 SCN8AQ9UQD0 1980 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 MYL12BO14950 172 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 TSPAN6O43657 245 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 NCR1O76036 304 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 KLK1P06870 262 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 GALTP07902 379 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 ASMTP46597 345 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 P2RY14Q15391 338 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CCDC85BQ15834 202 aaPredicted RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 TATDN3Q17R31 274 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
PRKN-205ENST00000366897 BRAT1Q6PJG6 821 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CEACAM20Q6UY09 585 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CHST14Q8NCH0 376 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 OR2AP1Q8NGE2 309 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 CHTF18Q8WVB6 975 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 SCRN2Q96FV2 425 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 RACGAP1Q9H0H5 632 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 SPNS1Q9H2V7 528 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms