RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 HNF4AP41235 474 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 MSH2P43246 934 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 SERPINB8P50452 374 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 NUP107P57740 925 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 RAB8AP61006 207 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 OLR1P78380 273 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 BTG2P78543 158 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 FOLH1Q04609 750 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 DOC2AQ14183 400 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 SLBPQ14493 270 aaKnown RBP eCLIP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 ACAP2Q15057 778 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 PDK4Q16654 411 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 DEFB134Q4QY38 66 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 TMIGD1Q6UXZ0 262 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 ACAD11Q709F0 780 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 CYP4Z2PQ8N1L4 340 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 CHDHQ8NE62 594 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 TRPV3Q8NET8 790 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 RHEBL1Q8TAI7 183 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 WDR34Q96EX3 536 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 PTCHD1Q96NR3 888 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 CNOT10Q9H9A5 744 aaKnown RBP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 CLK4Q9HAZ1 481 aaKnown RBP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 ZNF180Q9UJW8 692 aa10.85□□□□□ -0.67
MRPL55-213ENST00000366740 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
MRPL55-213ENST00000366740 NSD1Q96L73 2696 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TRIM49D1C9J1S8 452 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CLGNO14967 610 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 H2AFYO75367 372 aaKnown RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 SERPINA6P08185 405 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 ABHD2P08910 425 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 HNRNPH1P31943 449 aaKnown RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 SERPINB9P50453 376 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CLCN2P51788 898 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 NR0B1P51843 470 aaKnown RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CHIT1Q13231 466 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 E2F2Q14209 437 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 SLC29A2Q14542 456 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TERF2Q15554 542 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 FAM83EQ2M2I3 478 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 XKR6Q5GH73 641 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TECRLQ5HYJ1 363 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TOR1AIP1Q5JTV8 583 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TRMT10CQ7L0Y3 403 aaKnown RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 LRRC70Q7Z2Q7 622 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 MDGA2Q7Z553 956 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CCDC91Q7Z6B0 441 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CCDC71Q8IV32 467 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 MMP21Q8N119 569 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TMEM151AQ8N4L1 468 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 TBC1D19Q8N5T2 526 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 SNX31Q8N9S9 440 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 B3GNT7Q8NFL0 401 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 UBTD2Q8WUN7 234 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 CAPS2Q9BXY5 557 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 EHD1Q9H4M9 534 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 NT5DC2Q9H857 520 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 ZDHHC11Q9H8X9 412 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 NECTIN3Q9NQS3 549 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 DEPPQ9NTK1 212 aa10.84□□□□□ -0.67
MRPL55-213ENST00000366740 ZNF223Q9UK11 482 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-213ENST00000366740 A0A0G2JN53 185 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 LRIT2A6NDA9 550 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 B4GALT2O60909 372 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 ITGA10O75578 1167 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 ZWINTO95229 277 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 S100BP04271 92 aaPredicted RBP10.83□□□□□ -0.68
MRPL55-213ENST00000366740 SBK3P0C264 359 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 KLK2P20151 261 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 MAOAP21397 527 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 CASP2P42575 452 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 GPR85P60893 370 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 RGS1Q08116 209 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 PCDH1Q08174 1060 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 PMPCAQ10713 525 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 MYBPHQ13203 477 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 SETDB1Q15047 1291 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 TEX35Q5T0J7 233 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 PAOXQ6QHF9 649 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 CLYBLQ8N0X4 340 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 KRT78Q8N1N4 520 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 TMEM156Q8N614 296 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 MS4A6EQ96DS6 147 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 PTCD3Q96EY7 689 aaKnown RBP10.83□□□□□ -0.68
MRPL55-213ENST00000366740 DLL4Q9NR61 685 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
MRPL55-213ENST00000366740 L3MBTL1Q9Y468 752 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 HEATR5AQ86XA9 2040 aa10.83□□□□□ -0.68
MRPL55-213ENST00000366740 TRBV11-1A0A0K0K1C0 115 aa10.82□□□□□ -0.68
MRPL55-213ENST00000366740 EXOC1LA0A1B0GW35 172 aa10.82□□□□□ -0.68
MRPL55-213ENST00000366740 PINLYPA6NC86 204 aa10.82□□□□□ -0.68
MRPL55-213ENST00000366740 OR14I1A6ND48 311 aa10.82□□□□□ -0.68
MRPL55-213ENST00000366740 SYCE1LA8MT33 242 aa10.82□□□□□ -0.68
MRPL55-213ENST00000366740 K7EPI3 171 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms