RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PTX3P26022 381 aaPredicted RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 BSGP35613 385 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 CYB561P49447 251 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 ARFIP1P53367 373 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 IGLV3-21P80748 117 aaPredicted RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 CUL3Q13618 768 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 SERTAD2Q14140 314 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 GGTA1PQ4G0N0 100 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 C18orf63Q68DL7 685 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 TTC19Q6DKK2 380 aaPredicted RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 LETMD1Q6P1Q0 360 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 GALNTL5Q7Z4T8 443 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 GPR180Q86V85 440 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 ZNF227Q86WZ6 799 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 HORMAD2Q8N7B1 307 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 ZNF321PQ8N8H1 164 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 TMEM178AQ8NBL3 297 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 OR4F6Q8NGB9 312 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 OR14A16Q8NHC5 309 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 MZB1Q8WU39 189 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 PTPMT1Q8WUK0 201 aaPredicted RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 SREK1Q8WXA9 508 aaKnown RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 MTFMTQ96DP5 389 aaKnown RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 FRMD6Q96NE9 622 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 TMEM237Q96Q45 408 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 SERPINI1Q99574 410 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 CCDC77Q9BR77 488 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 C1QTNF3Q9BXJ4 246 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 OR8D2Q9GZM6 311 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 LYARQ9NX58 379 aaKnown RBP9.65□□□□□ -0.86
YBX3-203ENST00000366286 TMEM216Q9P0N5 145 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 FETUBQ9UGM5 382 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 TBK1Q9UHD2 729 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 PPT2Q9UMR5 302 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 ATG4BQ9Y4P1 393 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 CLCA3PQ9Y6N3 262 aa9.65□□□□□ -0.86
YBX3-203ENST00000366286 ASPDHA6ND91 283 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 PPP6CO00743 305 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 CDK2AP1O14519 115 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 NME2P1O60361 137 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 SEMA3DO95025 777 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 DDAH2O95865 285 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 OTCP00480 354 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 GBAP04062 536 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 SHBGP04278 402 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 SP1P08047 785 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 NR2F6P10588 404 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 TSPAN8P19075 237 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 NME2P22392 152 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 TNFRSF8P28908 595 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 TRHRP34981 398 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 BUD31P41223 144 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 HLCSP50747 726 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 CDH13P55290 713 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 HERVK_113P63132 956 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 FOLH1Q04609 750 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 IFT88Q13099 833 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 C4orf17Q53FE4 359 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 FRG2Q64ET8 278 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 MRM1Q6IN84 353 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 SLC25A25Q6KCM7 469 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 CYP20A1Q6UW02 462 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 GFRALQ6UXV0 394 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 C16orf47Q6ZP98 133 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 MILR1Q7Z6M3 343 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 LCA5Q86VQ0 697 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 NUDT13Q86X67 352 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 OR4N5Q8IXE1 308 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 CYP4Z2PQ8N1L4 340 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 EIF1ADQ8N9N8 165 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 MORN4Q8NDC4 146 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 SLC2A12Q8TD20 617 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 ACMSDQ8TDX5 336 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 UBLCP1Q8WVY7 318 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 DAZLQ92904 295 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 FRG2BQ96QU4 278 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 ERVK-6Q9BXR3 956 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 RPF2Q9H7B2 306 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 DDX31Q9H8H2 851 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 TRIM45Q9H8W5 580 aaPredicted RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 LIN28AQ9H9Z2 209 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 FARSBQ9NSD9 589 aaKnown RBP9.64□□□□□ -0.87
YBX3-203ENST00000366286 MS4A12Q9NXJ0 267 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 PSD3Q9NYI0 1048 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 ASB4Q9Y574 426 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 NCKAP5O14513 1909 aa9.64□□□□□ -0.87
YBX3-203ENST00000366286 A0A1W2PR48 441 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 A1L4Q6 167 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 WIPF3A6NGB9 483 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 GLOD5A6NK44 160 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 FOXO6A8MYZ6 492 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 PROM1O43490 865 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 DLX3O60479 287 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 OR2J2O76002 312 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 WISP2O76076 250 aa9.63□□□□□ -0.87
YBX3-203ENST00000366286 ZFAND5O76080 213 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms