RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 NHEJ1Q9H9Q4 299 aaPredicted RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 FAM60AQ9NP50 221 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ABHD10Q9NUJ1 306 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ASF1BQ9NVP2 202 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ERRFI1Q9UJM3 462 aaPredicted RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TFR2Q9UP52 801 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PTRH2Q9Y3E5 179 aaKnown RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 HEBP2Q9Y5Z4 205 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ALG6Q9Y672 507 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TEX15Q9BXT5 2789 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 NUP210LQ5VU65 1888 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 HIVEP3Q5T1R4 2406 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ANKRD12Q6UB98 2062 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SPTAN1Q13813 2472 aaKnown RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 C5orf60A6NFR6 353 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 C2orf74A8MZ97 194 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 HACD1B0YJ81 288 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 AGPSO00116 658 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 IFRD1O00458 451 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PSTPIP1O43586 416 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ALOX12BO75342 701 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 KLF7O75840 302 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 OR2B3O76000 313 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ANXA9O76027 345 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CBX6O95503 412 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 DDAH2O95865 285 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 LDLRP01130 860 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 TPM3P06753 285 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 TPM1P09493 284 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PRSS56P0CW18 603 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ATP1B2P14415 290 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ADRA1AP35348 466 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 DCTP40126 519 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZNF140P52738 457 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CFHR3Q02985 330 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 KLF9Q13886 244 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 TRIM14Q14142 442 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 BRD3Q15059 726 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZIC1Q15915 447 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZRANB3Q5FWF4 1079 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CCDC181Q5TID7 509 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ITPRIPL1Q6GPH6 555 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZNF425Q6IV72 752 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SARM1Q6SZW1 724 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 RANBP10Q6VN20 620 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 TAS2R42Q7RTR8 314 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SNX20Q7Z614 316 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 HOOK3Q86VS8 718 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 KATNAL2Q8IYT4 538 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 RCOR2Q8IZ40 523 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ADGRF3Q8IZF5 1079 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 IQCKQ8N0W5 287 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CLDN19Q8N6F1 224 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CLEC1AQ8NC01 280 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 OR5AR1Q8NGP9 310 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 OSR1Q8TAX0 266 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CCDC110Q8TBZ0 833 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 KRT35Q92764 455 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ULK4Q96C45 1275 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 DNAJC1Q96KC8 554 aaKnown RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 RANBP9Q96S59 729 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 COPS8Q99627 209 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PITPNM3Q9BZ71 974 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SPRTNQ9H040 489 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ILKAPQ9H0C8 392 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 OR52A5Q9H2C5 316 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SLC25A32Q9H2D1 315 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SYTL2Q9HCH5 934 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 IRAK4Q9NWZ3 460 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 TUBA8Q9NY65 449 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 SPHK1Q9NYA1 384 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 IFT80Q9P2H3 777 aaPredicted RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 KLHL13Q9P2N7 655 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 DHCR7Q9UBM7 475 aaKnown RBP4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 LPAR3Q9UBY5 353 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 ICKQ9UPZ9 632 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 B3GNT3Q9Y2A9 372 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PADI2Q9Y2J8 665 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 CROCCQ5TZA2 2017 aa4.95□□□□□ -1.62
RNU4-4P-201ENST00000364588 PCM1Q15154 2024 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 DOCK10Q96BY6 2186 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 RP1L1Q8IWN7 2480 aaPredicted RBP4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 C17orf113A0A1B0GUU1 675 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 ANKUB1A6NFN9 424 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 AGAP14A8MT82 685 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 F8W8V4 182 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 PEX12O00623 359 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZSCAN9O15535 394 aaPredicted RBP4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 KCNN4O15554 427 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 CNOT3O75175 753 aaKnown RBP4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 ALPPP05187 535 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 HBQ1P09105 142 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 TMEM225BP0DP42 221 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 UGT2B7P16662 529 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 CTNNA2P26232 953 aa4.94□□□□□ -1.62
RNU4-4P-201ENST00000364588 HADHAP40939 763 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms