RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ERVK-21P61565 698 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 DEFA5Q01523 94 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TAF1AQ15573 450 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SRFBP1Q8NEF9 429 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 OR4K1Q8NGD4 311 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 KLHL6Q8WZ60 621 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 KCNN2Q9H2S1 579 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SPATA6Q9NWH7 488 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PRSS21Q9Y6M0 314 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 MGAT4DA6NG13 374 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 TLR4O00206 839 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 AKAP8O43823 692 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 DRD5P21918 477 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 STOMP27105 288 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 GATMP50440 423 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CLDN8P56748 225 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ACSM2AQ08AH3 577 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 MFSD13AQ14CX5 517 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 KLHL22Q53GT1 634 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ACSM2BQ68CK6 577 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 C12orf66Q96MD2 445 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 PARK7Q99497 189 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ACPTQ9BZG2 426 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SPNS1Q9H2V7 528 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CSNK1G1Q9HCP0 422 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ELOVL2Q9NXB9 296 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ACSL6Q9UKU0 697 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 NEU3Q9UQ49 428 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ZNF670-ZNF695F2Z2N8 137 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 PRRG1O14668 218 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SEPT4O43236 478 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 MRPS14O60783 128 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 WISP3O95389 354 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CLDN9O95484 217 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ANXA5P08758 320 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ANXA8P13928 327 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ELNP15502 786 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 DGKAP23743 735 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CORO1AP31146 461 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 INSL4Q14641 139 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ZNF782Q6ZMW2 699 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 UBE2R2Q712K3 238 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 NAGSQ8N159 534 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 C11orf24Q96F05 449 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 TOE1Q96GM8 510 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ZFP3Q96NJ6 502 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 PITX2Q99697 317 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 TSSK6Q9BXA6 273 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 WASH6PQ9NQA3 447 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 NUDT4Q9NZJ9 180 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 HCN2Q9UL51 889 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 M0R233 179 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SYN3O14994 580 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 EEF1E1O43324 174 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 PCDH7O60245 1069 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 RGS11O94810 467 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CFDP00746 253 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 RAF1P04049 648 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 HLA-EP13747 358 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ZNF30P17039 623 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 ATP5C1P36542 298 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SRP9P49458 86 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 RPS25P62851 125 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 FGL2Q14314 439 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 GRK1Q15835 563 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 HKDC1Q2TB90 917 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 NDUFAF5Q5TEU4 345 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CXorf57Q6NSI4 855 aaKnown RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 FAHD1Q6P587 224 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 HDDC2Q7Z4H3 204 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 C11orf96Q7Z7L8 435 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 CCDC117Q8IWD4 279 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-201ENST00000361716 FTMTQ8N4E7 242 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 DENND6BQ8NEG7 585 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SGTBQ96EQ0 304 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 RADILQ96JH8 1075 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 B3GAT2Q9NPZ5 323 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
VAMP1-201ENST00000361716 OR2AG2A6NM03 316 aa12.13□□□□□ -0.47
VAMP1-201ENST00000361716 PRR23D1E9PI22 279 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-201ENST00000361716 H0YC42 278 aa12.13□□□□□ -0.47
VAMP1-201ENST00000361716 TBL1XO60907 577 aa12.13□□□□□ -0.47
VAMP1-201ENST00000361716 GATBO75879 557 aaKnown RBP12.13□□□□□ -0.47
VAMP1-201ENST00000361716 PAHP00439 452 aa12.13□□□□□ -0.47
VAMP1-201ENST00000361716 PRR23D2P0DMB1 279 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-201ENST00000361716 ETFAP13804 333 aa12.13□□□□□ -0.47
VAMP1-201ENST00000361716 CXCL3P19876 107 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms