RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FRMPD2BQ6IN97 320 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNF782Q6ZMW2 699 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RFPL4BQ6ZWI9 263 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC24A5Q71RS6 500 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RANBP3LQ86VV4 465 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PCDHGB1Q9Y5G3 927 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ANXA2P2A6NMY6 339 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ANXA2P07355 339 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 DRD5P21918 477 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 MTNR1AP48039 350 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 TSC22D1Q15714 1073 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 MPPE1Q53F39 396 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 SLX4IPQ5VYV7 408 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 FAM205BPQ63HN1 556 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 XAF1Q6GPH4 301 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 DLEU7Q6UYE1 221 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 USP51Q70EK9 711 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 KLBQ86Z14 1044 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 IQCF1Q8N6M8 205 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RHBDF1Q96CC6 855 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 NEUROD4Q9HD90 331 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 OSER1Q9NX31 292 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 CFAP97Q9P2B7 532 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 NUP205Q92621 2012 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RREB1Q92766 1687 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PDGFAP04085 211 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 HTR3AP46098 478 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 HAGHLQ6PII5 290 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 TMEM207Q6UWW9 146 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PEG10Q86TG7 708 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PHYKPLQ8IUZ5 450 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNF557Q8N988 423 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 SOCS4Q8WXH5 440 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ZC3H10Q96K80 434 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 CCDC3Q9BQI4 270 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 RBCK1Q9BYM8 510 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 C11orf54Q9H0W9 315 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 CDH10Q9Y6N8 788 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 STK25O00506 426 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 FLRT2O43155 660 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 AOC2O75106 756 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 BDKRB1P46663 353 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 NCBP2P52298 156 aaKnown RBP eCLIP15.3■□□□□ 0.042e-7■□□□□ 8.3
CLSTN1-201ENST00000361311 ARMC6Q6NXE6 501 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SHFQ7M4L6 423 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC22A15Q8IZD6 547 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 OR5M11Q96RB7 305 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 ACPTQ9BZG2 426 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 PPA2Q9H2U2 334 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 PIGUQ9H490 435 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 NIPAL2Q9H841 368 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 GLTPQ9NZD2 209 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 FBXW2Q9UKT8 454 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 TEX51A0A1B0GUA7 166 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 WASHC1A8K0Z3 465 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SNAPC5O75971 98 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 IL1AP01583 271 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 MT-ND5P03915 603 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 IFNA6P05013 189 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 PKLRP30613 574 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 LRRN1Q6UXK5 716 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 NATD1Q8N6N6 113 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 GAL3ST1Q99999 423 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SUV39H2Q9H5I1 410 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 RNF167Q9H6Y7 350 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 COPZ2Q9P299 210 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SCAMP2O15127 329 aaKnown RBP15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 FKBP1BP68106 108 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 FAM180AQ6UWF9 173 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 ARSKQ6UWY0 536 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 NECTIN4Q96NY8 510 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC39A1Q9NY26 324 aa15.3■□□□□ 0.04
CLSTN1-201ENST00000361311 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 SP140Q13342 867 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 DOC2AQ14183 400 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNHIT3Q15649 155 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 SWI5Q1ZZU3 235 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 GPRC6AQ5T6X5 926 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 OR51J1Q9H342 316 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 A0A1B0GVI7 797 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 MTHFD2P13995 350 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 UGT3A2Q3SY77 523 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 TPRG1Q6ZUI0 275 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 CEACAM19Q7Z692 300 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 OR52N2Q8NGI0 321 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 OSTF1Q92882 214 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 MTG2Q9H4K7 406 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HPF1Q9NWY4 346 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 PTGESO14684 152 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 GRM6O15303 877 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 HIST1H2ABP04908 130 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 TRAPPC2P0DI81 140 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 TRAPPC2BP0DI82 140 aa15.29■□□□□ 0.04
CLSTN1-201ENST00000361311 MLLT3P42568 568 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms