RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CD36P16671 472 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 OR4C11Q6IEV9 310 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 ARRDC3Q96B67 414 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 WDR12Q9GZL7 423 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 PRODH2Q9UF12 536 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 EBLN1P0CF75 366 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF35P13682 527 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 PLGLAQ15195 96 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CLEC1AQ8NC01 280 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 FGF13Q92913 245 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 MAGEE1Q9HCI5 957 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 WASF3Q9UPY6 502 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CADM1Q9BY67 442 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 SP140LQ9H930 580 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 VDAC3Q9Y277 283 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CCNKO75909 580 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 PROS1P07225 676 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 SRCP12931 536 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 PITPNAQ00169 270 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 NPTX1Q15818 432 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 MORN1Q5T089 497 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 C9orf135Q5VTT2 229 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 OR5M10Q6IEU7 315 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 RAB43Q86YS6 212 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 G6PC3Q9BUM1 346 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 TRNAU1APQ9NX07 287 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 THUMPD1Q9NXG2 353 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CREG1O75629 220 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 GNG2P59768 71 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 GPX6P59796 221 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 NKAIN2Q5VXU1 208 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 SLC15A3Q8IY34 581 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 GGT3PA6NGU5 568 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 FAM86B1Q8N7N1 296 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR5AR1Q8NGP9 310 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 CAMK2AQ9UQM7 478 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 TEX13DA0A0J9YY54 714 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 ABOP16442 354 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 HNRNPA2B1P22626 353 aaKnown RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC26A5P58743 744 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 NPRL3Q12980 569 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 GRIN2CQ14957 1233 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 HERC3Q15034 1050 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 PGAM5Q96HS1 289 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 ANKRD27Q96NW4 1050 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 DPH2Q9BQC3 489 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 CRB3Q9BUF7 120 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 SIT1Q9Y3P8 196 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 AKAP12Q02952 1782 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 HMGN1P05114 100 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 GNRHRP30968 328 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 GPR4P46093 362 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 HERV-K104P61576 105 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 RPS15AP62244 130 aaKnown RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR51G2Q8NGK0 314 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 FRS2Q8WU20 508 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 TMEM234Q8WY98 164 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 FAM159BA6NKW6 160 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZDHHC24Q6UX98 284 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 LRRC25Q8N386 305 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 EFCAB7A8K855 629 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 FAM171A2A8MVW0 826 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 KDM4BO94953 1096 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC6A6P31641 620 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 CRYZQ08257 329 aaKnown RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC35B2Q8TB61 432 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 GNPDA2Q8TDQ7 276 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 CWH43Q9H720 699 aa19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 MRM3Q9HC36 420 aaKnown RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 MARCH4Q9P2E8 410 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-201ENST00000361246 POLR1CO15160 346 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 CDH11P55287 796 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 GAS6Q14393 721 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 RAB11FIP2Q7L804 512 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 LRRTM3Q86VH5 581 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 TMEM17Q86X19 198 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 CASTOR1Q8WTX7 329 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZIC5Q96T25 663 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 TAS2R1Q9NYW7 299 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 C14orf166Q9Y224 244 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF99A8MXY4 864 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 MAFKO60675 156 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 BPIP17213 487 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 MAZP56270 477 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 SMURF2Q9HAU4 748 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 OARD1Q9Y530 152 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 UNCXA6NJT0 531 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 APBB3O95704 486 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 EGFLAMQ63HQ2 1017 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR8H1Q8NGG4 311 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR5B2Q96R09 309 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC6A17Q9H1V8 727 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF576Q9H609 170 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 PCDHGA2Q9Y5H1 932 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 UQCRC2P22695 453 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC18A1P54219 525 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 FXYD6P3P58550 94 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 LRRC26Q2I0M4 334 aa19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 PTCRAQ6ISU1 281 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-201ENST00000361246 ADAMTS19Q8TE59 1207 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms