RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 DMRT3Q9NQL9 472 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 SEMA3GQ9NS98 782 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 KLHL42Q9P2K6 505 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 KLHL3Q9UH77 587 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 CFL2Q9Y281 166 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 KLHL20Q9Y2M5 609 aa11.57□□□□□ -0.56
CLIP3-201ENST00000360535 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 GLOD5A6NK44 160 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 FFAR1O14842 300 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 UGDHO60701 494 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 C1orf105O95561 183 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 IFNA14P01570 189 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 C1GALT1C1LP0DN25 315 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 XCR1P46094 333 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 IFITM2Q01629 132 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 CDC20Q12834 499 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TCEA2Q15560 299 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 DCST1Q5T197 706 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TMPRSS11AQ6ZMR5 421 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TRIM48Q8IWZ4 208 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TCEAL8Q8IYN2 117 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 OTULINQ96BN8 352 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 C11orf24Q96F05 449 aaPredicted RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TMEM19Q96HH6 336 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 FCRL1Q96LA6 429 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 POLR2J3Q9H1A7 115 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TMEM98Q9Y2Y6 226 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 HCFC2Q9Y5Z7 792 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 M0R3H8 397 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 MRPS14O60783 128 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TM4SF4P48230 202 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 XKP51811 444 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 UBE3AQ05086 875 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 PRKCDQ05655 676 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 SPHARQ15513 63 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 BAK1Q16611 211 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 C22orf42Q6IC83 251 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 BRAT1Q6PJG6 821 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 FAM131AQ6UXB0 335 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 NEK10Q6ZWH5 1172 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 ZNF367Q7RTV3 350 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 FAM46DQ8NEK8 389 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 ING5Q8WYH8 240 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 OPALINQ96PE5 141 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 CTRCQ99895 268 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 DYRK4Q9NR20 520 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 MYL12BO14950 172 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 SLC28A2O43868 658 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 PSMA1P25786 263 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TIMM50Q3ZCQ8 353 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TYW3Q6IPR3 259 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TUBA3EQ6PEY2 450 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TMC5Q6UXY8 1006 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 USP30Q70CQ3 517 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 CRIPAKQ8N1N5 446 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 OR56A3Q8NH54 315 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 SLC38A5Q8WUX1 472 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 SDHCQ99643 169 aaPredicted RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 MACROD1Q9BQ69 325 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 ZSCAN5AQ9BUG6 496 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TSSK6Q9BXA6 273 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 CPEB1Q9BZB8 566 aaKnown RBP11.56□□□□□ -0.56
CLIP3-201ENST00000360535 BARHL1Q9BZE3 327 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 UCK2Q9BZX2 261 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 ANKHQ9HCJ1 492 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 TAAR2Q9P1P5 351 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 MKLN1Q9UL63 735 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 GPR52Q9Y2T5 361 aa11.56□□□□□ -0.56
CLIP3-201ENST00000360535 SCN2AQ99250 2005 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 PLD2O14939 933 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 NPC1O15118 1278 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 SCAMP1O15126 338 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 CSO75390 466 aaKnown RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 GPC1P35052 558 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 NTHL1P78549 312 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 DBPQ10586 325 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 TEAD2Q15562 447 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 CCDC85BQ15834 202 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 HENMT1Q5T8I9 393 aaKnown RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 ZDHHC20Q5W0Z9 365 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 REEP3Q6NUK4 255 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 SLC39A11Q8N1S5 342 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 IL17RDQ8NFM7 739 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 C17orf50Q8WW18 174 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 REPS1Q96D71 796 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 MAGEB10Q96LZ2 347 aaPredicted RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 DEFB118Q96PH6 123 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 SMAD5Q99717 465 aaKnown RBP11.55□□□□□ -0.56
CLIP3-201ENST00000360535 HHATLQ9HCP6 504 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 SEC14L3Q9UDX4 400 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 TMCC2O75069 709 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 CYP17A1P05093 508 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 RHCEP18577 417 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 CBLP22681 906 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 PSMB5P28074 263 aa11.55□□□□□ -0.56
CLIP3-201ENST00000360535 GPR1P46091 355 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms