RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CSTAP01040 98 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR8S1Q8NH09 359 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 DDIT4LQ96D03 193 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 POLDIP3Q9BY77 421 aaKnown RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 NRP1O14786 923 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GRID2O43424 1007 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 NUDT1P36639 197 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 SPRYD4Q8WW59 207 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 ARHGAP39Q9C0H5 1083 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 MEPEQ9NQ76 525 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 VNN3Q9NY84 501 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 NENFQ9UMX5 172 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 SHOX2O60902 331 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 CLDN7O95471 211 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 CD48P09326 243 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ECM1Q16610 540 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.32□□□□□ -0.926e-6■■■■■ 38.3
CUX1-203ENST00000360264 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GPR22Q99680 433 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LOC102723532A0A0G2JNH3 316 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LATO43561 262 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ACRV1P26436 265 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR13C4Q8NGS5 318 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ZNF559Q9BR84 538 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 PTGIRP43119 386 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ATP4BP51164 291 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 TDGQ13569 410 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GRM7Q14831 915 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 FLYWCH1Q4VC44 716 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 LRRC25Q8N386 305 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 CCDC71LQ8N9Z2 235 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 C2CD4AQ8NCU7 369 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR5M3Q8NGP4 307 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 TBCCD1Q9NVR7 557 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GSKIPQ9P0R6 139 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 SLC7A8Q9UHI5 535 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 C13orf42A0A1B0GVH6 325 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 FBLP22087 321 aaKnown RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 EMX2Q04743 252 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 TEX26Q8N6G2 289 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 WDR77Q9BQA1 342 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 KCNIP1Q9NZI2 227 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 RNF6Q9Y252 685 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 VAMP1P23763 118 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 RORAP35398 523 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 GGT2P36268 569 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 HSD17B7P56937 341 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 PRKCZQ05513 592 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR8J1Q8NGP2 316 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 MMABQ96EY8 250 aaPredicted RBP9.32□□□□□ -0.92
CUX1-203ENST00000360264 OR8D2Q9GZM6 311 aa9.32□□□□□ -0.92
CUX1-203ENST00000360264 ZNF487B1APH4 448 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 IFNA4P05014 189 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ERVK-16P61578 105 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TMEM69Q5SWH9 247 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 IL22RA1Q8N6P7 574 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 OR5L1Q8NGL2 311 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 DMRTB1Q96MA1 342 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 POTEKPQ9BYX7 375 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RXFP3Q9NSD7 469 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CLCA1A8K7I4 914 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 MLLT6P55198 1093 aaPredicted RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 ATG9BQ674R7 924 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SLC18B1Q6NT16 456 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ARL14Q8N4G2 192 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 WDSUB1Q8N9V3 476 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SMG8Q8ND04 991 aaKnown RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 ENAMQ9NRM1 1142 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 COPZ2Q9P299 210 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 MEGF11A6BM72 1044 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SOX1O00570 391 aaPredicted RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 ACTBP60709 375 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ACTG1P63261 375 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GALNT2Q10471 571 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SLC27A4Q6P1M0 643 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 LIX1LQ8IVB5 337 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CHIAQ9BZP6 476 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 EDARQ9UNE0 448 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 OR2B3O76000 313 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 LATS1O95835 1130 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 BCHEP06276 602 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 DDCP20711 480 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ACVRL1P37023 503 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RABIFP47224 123 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TMEM110Q86TL2 294 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GPR34Q9UPC5 381 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 NFAT5O94916 1531 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 MAGP20916 626 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TCTE1Q5JU00 501 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GALNT12Q8IXK2 581 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GPR137CQ8N3F9 429 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CSNK1A1LQ8N752 337 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 VILLO15195 856 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SLC16A9Q7RTY1 509 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RNF130Q86XS8 419 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RAB39BQ96DA2 213 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms