RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CCM2LQ9NUG4 571 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR6C2Q9NZP2 312 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PCTPQ9UKL6 214 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PIGBOS1A0A0B4J2F0 54 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 FABP12A6NFH5 140 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TNFRSF21O75509 655 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PGCP20142 388 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CDKL1Q00532 357 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ABRAXAS2Q15018 415 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 VMACQ2NL98 169 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ISLR2Q6UXK2 745 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PDSS2Q86YH6 399 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR9I1Q8NGQ6 314 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CCDC107Q8WV48 283 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 DEFB126Q9BYW3 111 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TXLNGYQ9BZA5 131 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 MARCH4Q9P2E8 410 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 RABL2AQ9UBK7 228 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 LAMP5Q9UJQ1 280 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 RABL2BQ9UNT1 228 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SPO11Q9Y5K1 396 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 K7ERQ8 282 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 MUSKO15146 869 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CSTAP01040 98 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 APOC1P02654 83 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CEBPBP17676 345 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 GABRA3P34903 492 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CAPZA1P52907 286 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CDH11P55287 796 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR4D2P58180 307 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SELENOVP59797 346 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CLEC12AQ5QGZ9 265 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PLEKHG7Q6ZR37 379 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ANKRD33Q7Z3H0 272 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TRIM74Q86UV6 250 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TTC9BQ8N6N2 239 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR4K1Q8NGD4 311 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF420Q8TAQ5 688 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 MCHR1Q99705 422 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PIP5K1AQ99755 562 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TUBA1CQ9BQE3 449 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CHMP1AQ9HD42 196 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 MEMO1Q9Y316 297 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TEX13CA0A0J9YWL9 993 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SOCS7O14512 581 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TRAPPC6AO75865 159 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 IL3P08700 152 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 GADD45AP24522 165 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 KDELR2P33947 212 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 FAM189BP81408 668 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 GAS6Q14393 721 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TAZQ16635 292 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SLC27A4Q6P1M0 643 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 RASSF6Q6ZTQ3 369 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 KLHDC8AQ8IYD2 350 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ENDOVQ8N8Q3 282 aaKnown RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR2L5Q8NG80 312 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR2L2Q8NH16 312 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 FANK1Q8TC84 345 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 RHBDF1Q96CC6 855 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 NTMT1Q9BV86 223 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 OR8D2Q9GZM6 311 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 WASF2Q9Y6W5 498 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 H3BUI4 141 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 WRBO00258 174 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 PHYHO14832 338 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 YKT6O15498 198 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF84P51523 738 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 DEFB103AP81534 67 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SF3B4Q15427 424 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SHQ1Q6PI26 577 aaKnown RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 KCTD18Q6PI47 426 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 FIGLAQ6QHK4 219 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 C6orf89Q6UWU4 347 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CCDC54Q8NEL0 328 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 HDAC2Q92769 488 aaKnown RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TP53INP1Q96A56 240 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TGM7Q96PF1 710 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 ZFYVE21Q9BQ24 234 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 MTHFD2LQ9H903 347 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 TREX1Q9NSU2 369 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 CNOT11Q9UKZ1 510 aaKnown RBP4.66□□□□□ -1.66
SCN3A-202ENST00000360093 HS3ST2Q9Y278 367 aa4.66□□□□□ -1.66
SCN3A-202ENST00000360093 COL5A3P25940 1745 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ACOX3O15254 700 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF432O94892 652 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 GBAP04062 536 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 OR12D1P0DN82 309 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 NELFEP18615 380 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CD72P21854 359 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ARSDP51689 593 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 TAS2R38P59533 333 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 RPS3AP61247 264 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 MGAT3Q09327 533 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PNCKQ6P2M8 343 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms