RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LRRC61Q9BV99 259 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 SPNS1Q9H2V7 528 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 TRBV23OR9-2A0A075B6M9 112 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 PATE3B3GLJ2 98 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 KDM1AO60341 852 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 GUCY1B2O75343 617 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 TGFB1P01137 390 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 INHBBP09529 407 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 CTSEP14091 401 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 IL1RNP18510 177 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 CHRNB3Q05901 458 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 USP51Q70EK9 711 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 USP43Q70EL4 1123 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF420Q8TAQ5 688 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 ZC3H10Q96K80 434 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 NRTNQ99748 197 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 BDH2Q9BUT1 245 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 LHPPQ9H008 270 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 MVB12BQ9H7P6 319 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 NTN4Q9HB63 628 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 AHSPQ9NZD4 102 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 TAC3Q9UHF0 121 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 SPEGQ15772 3267 aa13.2□□□□□ -0.3
CSNK1E-201ENST00000359867 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 LOC105371267A0A1B0GV96 52 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 NOBOXO60393 691 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SULT1C4O75897 302 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 EPN2O95208 641 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 GSNP06396 782 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 LAMP1P11279 417 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CCNA2P20248 432 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CNR2P34972 360 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 PCYT1AP49585 367 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 HLCSP50747 726 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CCR8P51685 355 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 RAB15P59190 212 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 BNC1Q01954 994 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 MEF2AQ02078 507 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SF1Q15637 639 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 RFPL4BQ6ZWI9 263 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 OR4K1Q8NGD4 311 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CDC26Q8NHZ8 85 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CSF3RQ99062 836 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CTRCQ99895 268 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 BHLHE41Q9C0J9 482 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 OR51B5Q9H339 312 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 REEP4Q9H6H4 257 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 MYNNQ9NPC7 610 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 IMP3Q9NV31 184 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 UTS2RQ9UKP6 389 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 A0A1W2PPV9 198 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CLIC1O00299 241 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SH3BGRLO75368 114 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 SEMA3DO95025 777 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CSF2P04141 144 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 CFIP05156 583 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 NME1P15531 152 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 GNSP15586 552 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 GPX2P18283 190 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 PPIBP23284 216 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 ILF3Q12906 894 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 ITGADQ13349 1161 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 PATE1Q8WXA2 126 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 HPS1Q92902 700 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 TBCDQ9BTW9 1192 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 DGCR6LQ9BY27 220 aa13.19□□□□□ -0.3
CSNK1E-201ENST00000359867 ANKDD1BA6NHY2 528 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 RNASET2O00584 256 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 CREG1O75629 220 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 TPPPO94811 219 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 RAB28P51157 221 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 REEP5Q00765 189 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF621Q6ZSS3 439 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 TAF8Q7Z7C8 310 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 SMOC1Q9H4F8 434 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
CSNK1E-201ENST00000359867 DCAF13Q9NV06 445 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms