RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF536O15090 1300 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 A0A0G2JMP0 313 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 UPK1BO75841 260 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MT-ND2P03891 347 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 HMGCS1Q01581 520 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 CCDC58Q4VC31 144 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 OR4M2Q8NGB6 313 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 AUTS2Q8WXX7 1259 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 FBXL20Q96IG2 436 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 DNTTIP1Q9H147 329 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 FBXW11Q9UKB1 542 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TPPPO94811 219 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 EDNRBP24530 442 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 EMX2Q04743 252 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MR1Q95460 341 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 CMTM7Q96FZ5 175 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MSLNLQ96KJ4 702 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 OR1F2PQ96R84 312 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TMEM185BQ9H7F4 350 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SH3BGRL2Q9UJC5 107 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ZNF850A8MQ14 1090 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 FHP07954 510 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 CYCSP99999 105 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MFSD13AQ14CX5 517 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TMEM35AQ53FP2 167 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TAC4Q86UU9 113 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 NLGN4XQ8N0W4 816 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 GNG13Q9P2W3 67 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 A0A1W2PPK0 400 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TMEM63AO94886 807 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 IFNA5P01569 189 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ATG9BQ674R7 924 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SIMC1Q8NDZ2 872 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 PEX13Q92968 403 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 KIAA1143Q96AT1 154 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MUS81Q96NY9 551 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 UQCC2Q9BRT2 126 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 OR51I1Q9H343 314 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ATXN7L1Q9ULK2 861 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 PPRC1Q5VV67 1664 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 POLR2HP52434 150 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ACTC1P68032 377 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ACTA1P68133 377 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SRYQ05066 204 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MEP1AQ16819 746 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 DUOXA1Q1HG43 343 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 RPL13AP3Q6NVV1 102 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TTLL10Q6ZVT0 673 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 DTX3Q8N9I9 347 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SH3RF2Q8TEC5 729 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 LIN37Q96GY3 246 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 CCM2Q9BSQ5 444 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 A0A0U1RQK1 487 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 PROM1O43490 865 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 DIRAS1O95057 198 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 C4BPAP04003 597 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 LMO2P25791 158 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 CD6P30203 668 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MLLT1Q03111 559 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 HACD4Q5VWC8 232 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 MINDY1Q8N5J2 469 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 OR6Q1Q8NGQ2 317 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 KCNJ9Q92806 393 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 FCRL5Q96RD9 977 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 ACBD6Q9BR61 282 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 NT5DC2Q9H857 520 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
SPTBN1-202ENST00000356805 F5H0A9 414 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 H2AFB2P0C5Z0 115 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 CHRNA4P43681 627 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 ALDH3B2P48448 385 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 RGS6P49758 472 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 GPM6BQ13491 265 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 CDNFQ49AH0 187 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 LRIF1Q5T3J3 769 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 GPR157Q5UAW9 335 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 GATSQ8NAP1 163 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 OR7G1Q8NGA0 311 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 NSMAFQ92636 917 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 ARL11Q969Q4 196 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 MRI1Q9BV20 369 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 TFPTP0C1Z6 253 aa11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-202ENST00000356805 SLC15A3Q8IY34 581 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms