RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 VIPR1P32241 457 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 CDK9P50750 372 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 CDK18Q07002 472 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 FHL1Q13642 323 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 DCAF4L1Q3SXM0 396 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ZNF658BQ4V348 819 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 LRRC23Q53EV4 343 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 C10orf120Q5SQS8 335 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ZCCHC8Q6NZY4 707 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 PRSS45Q7RTY3 260 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 CALHM3Q86XJ0 350 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ANGPTL6Q8NI99 470 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 FRMD8Q9BZ67 464 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 CXorf36Q9H7Y0 433 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 TMEM98Q9Y2Y6 226 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 OR1A2Q9Y585 309 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ADAM10O14672 748 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 RAD51BO15315 384 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 TSPAN6O43657 245 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ACSL4O60488 711 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 LDHAP00338 332 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 DCNP07585 359 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 PRKCAP17252 672 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 WARSP23381 471 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 MYF6P23409 242 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ATP5F1P24539 256 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 CORO1AP31146 461 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 BDKRB1P46663 353 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 CLDN8P56748 225 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 RPP38P78345 283 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 NNATQ16517 81 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 TMEM205Q6UW68 189 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 GRASPQ7Z6J2 395 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 ZBTB8BQ8NAP8 495 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 OR51A4Q8NGJ6 313 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 METTL6Q8TCB7 284 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 MRPS31Q92665 395 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 HPS1Q92902 700 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 STMN2Q93045 179 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 IQCDQ96DY2 449 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ZDHHC12Q96GR4 267 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 TSGA13Q96PP4 275 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 TEFMQ96QE5 360 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 ABHD1Q96SE0 405 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 CCDC90BQ9GZT6 254 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 MRPL17Q9NRX2 175 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 ATXN10Q9UBB4 475 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 R4GN57 208 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 AGRNO00468 2067 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 SMAD9O15198 467 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 FOXS1O43638 330 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ZNF189O75820 626 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 EGFP01133 1207 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 IFI30P13284 250 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 DCKP27707 260 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 KIR2DL3P43628 341 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 AP2B1P63010 937 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 EEF1A2Q05639 463 aaKnown RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 ENPEPQ07075 957 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 GTF2H3Q13889 308 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 KANK2Q63ZY3 851 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 RAB44Q7Z6P3 723 aaPredicted RBP5.31□□□□□ -1.56
CD47-201ENST00000355354 TIGD4Q8IY51 512 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 METTL4Q8N3J2 472 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 OR5T3Q8NGG3 340 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 REPS1Q96D71 796 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 LGALS12Q96DT0 336 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 CPNE1Q99829 537 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 GALNT9Q9HCQ5 603 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 SPAG4Q9NPE6 437 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 FAIMQ9NVQ4 179 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 SLCO1C1Q9NYB5 712 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 REV1Q9UBZ9 1251 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 ADGRE2Q9UHX3 823 aa5.31□□□□□ -1.56
CD47-201ENST00000355354 IMPA1P29218 277 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ID4P47928 161 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 LSSP48449 732 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SERPINH1P50454 418 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 OLR1P78380 273 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SARNPP82979 210 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 HYAL2Q12891 473 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 NR6A1Q15406 480 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 TYSND1Q2T9J0 566 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 C1QL3Q5VWW1 255 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 C18orf63Q68DL7 685 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ZFAND4Q86XD8 727 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MFN1Q8IWA4 741 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 AHI1Q8N157 1196 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 LRRC17Q8N6Y2 441 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 OR2A12Q8NGT7 310 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 OR2T4Q8NH00 348 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 UPRTQ96BW1 309 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 KCNS3Q9BQ31 491 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MGME1Q9BQP7 344 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 HGH1Q9BTY7 390 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 AASDHPPTQ9NRN7 309 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CFAP97Q9P2B7 532 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 RSL24D1Q9UHA3 163 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms