RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 H0YC42 278 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 STMND1H3BQB6 276 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 IGSF6O95976 241 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 POU2F1P14859 743 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 NNMTP40261 264 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 RPP38P78345 283 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 HYAL2Q12891 473 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ABRQ12979 859 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CHIT1Q13231 466 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 NDUFAF5Q5TEU4 345 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 MAMSTRQ6ZN01 415 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GPR149Q86SP6 731 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CCDC190Q86UF4 302 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GPR156Q8NFN8 814 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 WDR36Q8NI36 951 aaKnown RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 ZNF296Q8WUU4 475 aaPredicted RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 MED8Q96G25 268 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TMEM169Q96HH4 297 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 IGSF21Q96ID5 467 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CCDC115Q96NT0 180 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 GDF15Q99988 308 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CPPED1Q9BRF8 314 aaPredicted RBP8.97□□□□□ -0.97
SMG6-202ENST00000354901 HTATIP2Q9BUP3 242 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 CCDC32Q9BV29 185 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 KCTD5Q9NXV2 234 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 COPS3Q9UNS2 423 aa8.97□□□□□ -0.97
SMG6-202ENST00000354901 TRAV6A0A075B6T7 132 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 CARNS1A5YM72 827 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 FPGTO14772 594 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 PRAMEF4O60810 478 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 KDM4BO94953 1096 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 HPRP00739 348 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 IFNA14P01570 189 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 ENGP17813 658 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 LHCGRP22888 699 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 PSMA3P25788 255 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 GPC1P35052 558 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 SLC19A1P41440 591 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 NSG1P42857 185 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 KIR3DL1P43629 444 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 MAN2A2P49641 1150 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 CAV3P56539 151 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 B4GALNT1Q00973 533 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 TOR1AIP1Q5JTV8 583 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 PRAMEF9Q5VWM5 478 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 TMPRSS9Q7Z410 1059 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 TRIM46Q7Z4K8 759 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 OR52J3Q8NH60 311 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 P2RY13Q9BPV8 354 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 TMEM175Q9BSA9 504 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 WACQ9BTA9 647 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 NTMT1Q9BV86 223 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 CCNB1IP1Q9NPC3 277 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 COMMD3Q9UBI1 195 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 TRPS1Q9UHF7 1281 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 KLF15Q9UIH9 416 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 PCDHGB2Q9Y5G2 931 aa8.96□□□□□ -0.97
SMG6-202ENST00000354901 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 CLIC1O00299 241 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 MYL12BO14950 172 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 PI15O43692 258 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 C1QBP02746 253 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 NUDT7P0C024 238 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 COX7A2P14406 83 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 MYL12AP19105 171 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 DAPP51397 102 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 CLDN8P56748 225 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 OLR1P78380 273 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 VLDLRP98155 873 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 PCDH1Q08174 1060 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 ELP6Q0PNE2 266 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 LRRC32Q14392 662 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 ASB18Q6ZVZ8 466 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 SLC46A3Q7Z3Q1 461 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 HDDC2Q7Z4H3 204 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 SVOPLQ8N434 492 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 OR2AP1Q8NGE2 309 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 MAL2Q969L2 176 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 SGTBQ96EQ0 304 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 KCNH6Q9H252 994 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 NAALAD2Q9Y3Q0 740 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 MN1Q10571 1320 aaPredicted RBP8.96□□□□□ -0.98
SMG6-202ENST00000354901 C5orf42Q9H799 3197 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 OPN1SWP03999 348 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 GBAP04062 536 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 TNFRSF1BP20333 461 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 PBLDP30039 288 aaPredicted RBP8.96□□□□□ -0.98
SMG6-202ENST00000354901 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
SMG6-202ENST00000354901 RGS6P49758 472 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 IRF8Q02556 426 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 SCRN3Q0VDG4 424 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 CPZQ66K79 652 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 MACC1Q6ZN28 852 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 TAGAPQ8N103 731 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 ATP6V1C2Q8NEY4 427 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 FANK1Q8TC84 345 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 RANBP3Q9H6Z4 567 aaPredicted RBP8.96□□□□□ -0.98
SMG6-202ENST00000354901 PAK6Q9NQU5 681 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms