RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CFIP05156 583 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 FCGR1AP12314 374 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 PEX2P28328 305 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 MLLT3P42568 568 aaPredicted RBP20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 CRATP43155 626 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 MVDP53602 400 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 SNRPNP63162 240 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 HSPB3Q12988 150 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 RUNX2Q13950 521 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 VEZF1Q14119 521 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 ZNF528Q3MIS6 628 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 NKAIN2Q5VXU1 208 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 ERMP1Q7Z2K6 904 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 OR5AK3PQ8NH89 298 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 KLHL6Q8WZ60 621 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 PPWD1Q96BP3 646 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 AMDHD1Q96NU7 426 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 UGT2B28Q9BY64 529 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 GLIPR2Q9H4G4 154 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 EPS8L2Q9H6S3 715 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 ACSL6Q9UKU0 697 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 PADI4Q9UM07 663 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 DAPP1Q9UN19 280 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 PLCL2Q9UPR0 1127 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 MRPS2Q9Y399 296 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 LRRC42Q9Y546 428 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 SPACA6W5XKT8 324 aa20.3■□□□□ 0.84
TSPAN3-202ENST00000346495 HCRTR1O43613 425 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 PEX1O43933 1283 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 ERAL1O75616 437 aaKnown RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 TIPRLO75663 272 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 TLX1P31314 330 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 NCBP2P52298 156 aaKnown RBP eCLIP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 LIM2P55344 173 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 ADRM1Q16186 407 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 PRTGQ2VWP7 1150 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 FAM98BQ52LJ0 330 aaKnown RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 PLXDC1Q8IUK5 500 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 CATSPER1Q8NEC5 780 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 NETO1Q8TDF5 533 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 SAP25Q8TEE9 199 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 DNAJC9Q8WXX5 260 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 PDE7BQ9NP56 450 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 SIRT3Q9NTG7 399 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 DCAF13Q9NV06 445 aaKnown RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 OLAHQ9NV23 265 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 GPATCH2Q9NW75 528 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 SOHLH2Q9NX45 425 aa20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 FAF1Q9UNN5 650 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-202ENST00000346495 CACNA1EQ15878 2313 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 GALR3O60755 368 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 ZBTB11O95625 1053 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 CSNK2A2P19784 350 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 FASP25445 335 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 GPC1P35052 558 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 CDK9P50750 372 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 SPIDRQ14159 915 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 SPDYE7PQ495Y7 208 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 COX20Q5RI15 118 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 GCNT6Q5T4J0 391 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 SAXO2Q658L1 398 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 GATAD2AQ86YP4 633 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 EID3Q8N140 333 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 C11orf65Q8NCR3 313 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 ADCY4Q8NFM4 1077 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 OR6C4Q8NGE1 309 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 OR4C6Q8NH72 309 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 NEURL3Q96EH8 262 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 SEPHS2Q99611 448 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 DPH2Q9BQC3 489 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 NPLQ9BXD5 320 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 STARD5Q9NSY2 213 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 NAALAD2Q9Y3Q0 740 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 ZNF780BQ9Y6R6 833 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 PI4KAP42356 2102 aa20.28■□□□□ 0.84
TSPAN3-202ENST00000346495 IGHV5-51A0A0C4DH38 117 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 WASHC1A8K0Z3 465 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 B4GAT1O43505 415 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 TNFRSF21O75509 655 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 C9P02748 559 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 CAPNS1P04632 268 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 ETFAP13804 333 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 HOXB6P17509 224 aaKnown RBP20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 PCGF2P35227 344 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 GABRA4P48169 554 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 CHRNB3Q05901 458 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 RBBP4Q09028 425 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 CEBPEQ15744 281 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 NDUFA9Q16795 377 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 LRRC36Q1X8D7 754 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 GRAMD1BQ3KR37 738 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 WLSQ5T9L3 541 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 OR52E8Q6IFG1 317 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 RNF130Q86XS8 419 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 SAMD14Q8IZD0 417 aaPredicted RBP20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 FBXO30Q8TB52 745 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 FAM110BQ8TC76 370 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 CNRIP1Q96F85 164 aaPredicted RBP20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 ZNF285Q96NJ3 590 aa20.27■□□□□ 0.84
TSPAN3-202ENST00000346495 ANKHQ9HCJ1 492 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms