RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 FANCEQ9HB96 536 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 PRDM9Q9NQV7 894 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 CUTCQ9NTM9 273 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 UTS2RQ9UKP6 389 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SEC16AO15027 2179 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 A0A1W2PRB8 838 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 NME4O00746 187 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 PDPK1O15530 556 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SORBS2O94875 1100 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 TLX1P31314 330 aaPredicted RBP15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 RABL3Q5HYI8 236 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SAMD4BQ5PRF9 694 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 PHF19Q5T6S3 580 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 FAM180BQ6P0A1 224 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 HPS6Q86YV9 775 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SHISA5Q8N114 240 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 OR8J3Q8NGG0 315 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 GBP5Q96PP8 586 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 CSF3RQ99062 836 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 CDC6Q99741 560 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 TRIM8Q9BZR9 551 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 CLK4Q9HAZ1 481 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SLAMF7Q9NQ25 335 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SLC35C2Q9NQQ7 365 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SIDT1Q9NXL6 827 aaKnown RBP15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 CD300AQ9UGN4 299 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 SPACA6W5XKT8 324 aa15.43■□□□□ 0.06
CEACAM1-202ENST00000344391 ZNF292O60281 2723 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 PRORSD1PA6NEY8 169 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 H0YHG0 523 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 CYR61O00622 381 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 ZNF749O43361 778 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 CHST10O43529 356 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 GDF9O60383 454 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 ANP32DO95626 131 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 C6orf47O95873 294 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 ZCCHC18P0CG32 403 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 AVPR1BP47901 424 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 RAB38P57729 211 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 HBA1P69905 142 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 SELPLGQ14242 412 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 YOD1Q5VVQ6 348 aaPredicted RBP15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 ZNF621Q6ZSS3 439 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 B3GNT8Q7Z7M8 397 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 RNF148Q8N7C7 305 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 OR4A15Q8NGL6 344 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 RPF2Q9H7B2 306 aaKnown RBP15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 ACSS1Q9NUB1 689 aaPredicted RBP15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 PCDHGB4Q9UN71 923 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 L3MBTL1Q9Y468 752 aa15.42■□□□□ 0.06
CEACAM1-202ENST00000344391 MYO1GB0I1T2 1018 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 H0YIG0 161 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 FOXD2O60548 495 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 ERAL1O75616 437 aaKnown RBP15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 ME2P23368 584 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 PDX1P52945 283 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 MTPNP58546 118 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 SHC2P98077 582 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 ILKQ13418 452 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 MLC1Q15049 377 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 CEBPEQ15744 281 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 PRAMEF17Q5VTA0 474 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 OR52E8Q6IFG1 317 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 TTLL10Q6ZVT0 673 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 OR5P2Q8WZ92 322 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 MVB12AQ96EY5 273 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 CNRIP1Q96F85 164 aaPredicted RBP15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 OR6C1Q96RD1 312 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 NDC1Q9BTX1 674 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 TRIM4Q9C037 500 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 IKZF5Q9H5V7 419 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 TAS2R9Q9NYW1 312 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 PSME2Q9UL46 239 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 PCNX2A6NKB5 2137 aa15.41■□□□□ 0.06
CEACAM1-202ENST00000344391 ARSFP54793 590 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 MANFP55145 182 aaKnown RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 EEFSECP57772 596 aaKnown RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 ELF3P78545 371 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 SIM1P81133 766 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 C16orf72Q14CZ0 275 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 SPATS1Q496A3 300 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 TMEM52Q8NDY8 209 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 MMABQ96EY8 250 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 ZBED6CLQ96FA7 236 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 AURKBQ96GD4 344 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 ZNF681Q96N22 645 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 SH3GL1Q99961 368 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 CPPED1Q9BRF8 314 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 OCIAD1Q9NX40 245 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 HCN3Q9P1Z3 774 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 ZNF282Q9UDV7 671 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 VPS4AQ9UN37 437 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 CLCA2Q9UQC9 943 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 TMEM184BQ9Y519 407 aaPredicted RBP15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 FER1L5A0AVI2 2057 aa15.4■□□□□ 0.06
CEACAM1-202ENST00000344391 A8MUI8 341 aa15.39■□□□□ 0.05
CEACAM1-202ENST00000344391 FAM227AF5H4B4 570 aa15.39■□□□□ 0.05
CEACAM1-202ENST00000344391 NVLO15381 856 aaKnown RBP15.39■□□□□ 0.05
CEACAM1-202ENST00000344391 CIB2O75838 187 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms